Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9353g00003 ATGACCTTGGAGGGGATTTTCCTCGAGCCCACCTCAACCACTGCTCCTGATCTTTCCCTTCACATAAGCCCCCCAAGCATCTCCTCTTCCTTGATTTCCAACAACACCAATTATGAACAACCCCCTTCAAGGACTGTGTCTCAAGCCCACACAGAACTCTCTCTTGGAAGGAATTTCACTTCACCAACACCAACACCATCACAACACAATCCTTATTATCAAAGCCAAACCCATTTCCATCATCTTCACCACAACAGCACTGGCACTACTACTTCCACAAGTTCAACAAGTGTCGTCACAAGCGCCACCACTCCCTTGAGCCACATAAACTATGGAGTTTCATTGCTTGATGTATCCTCATCAGACGGCATGAGGCCAATCAAAGGGATTCCGGTGTATCACAACCGTTCGTTCCCTTTCGTGGCCATGGACCATGCTAGAGACAAGGAGCATCATCACAAGATGTGTTTATATAACCATCACATGCCTTCTTATCCCTCTCTCTCTTCTTCTTGTCCTTCTCTGTGTTCCACTGCTACCACCACTCCTTCTTCACCTTCACCCTACTTTGCAGCGGGTGTGGATCCCATGTCCCTTGCGTGTAGGGCAGCCACTGCCACAAGGTTTAACGGCTTCTCTGGCGATGCTTTCAAATCTCATCCATTGCACCAATATGGGGTTGCCACTTCAGAAGCCTCTTCTGGGTTAATGAGATCGAGGTTTTTGCCTAAGCTTCCCAACAAAAGGAGCATGAGAGCACCGAGAATGAGGTGGACTAGCACCCTCCATGCTCGATTTGTTCATGCTGTTGAACTCCTCGGTGGCCATGAAAGAGCTACTCCAAAATCAGTCCTTGAGCTCATGGATGTGAAGGATCTAACATTAGCTCATGTGAAAAGCCATTTGCAGATGTATCGAACTGTTAAGACCACTGACAAGCCTGCAGCATCTTCAGGCCTTTCTGATGGGTCTGGGGAGGATGATTTGTCTCCGATGGGTAGCACCGTTGATCGCGGTGGTCTCCGGCAATTCCCCAACCACAGAGGGCAGCCGGAATGGGCGGCGCAACAAGACATGGACTACTCTTCCAACACCACTCTGTGGAGTAATTCTTCAAGTTGTGGAGAGTCACGGCTAAGATCTAGTTCTAACGACATAGATGGTCTCAGATCACCTATCCTCCAGTCACATACAATATCAGGAGGGCATCAAAATCAGGAGTGTGATTCAACCCAACTCAAGAACAGCATGGCAGGTTCTAATTTGGAGTGCAAGAACCCAAGCTTGGAATTCACATTAGGAAGACCAGATTGGAATAATGGCAAAGAACAAGCCTAA 1338 0.4806 MTLEGIFLEPTSTTAPDLSLHISPPSISSSLISNNTNYEQPPSRTVSQAHTELSLGRNFTSPTPTPSQHNPYYQSQTHFHHLHHNSTGTTTSTSSTSVVTSATTPLSHINYGVSLLDVSSSDGMRPIKGIPVYHNRSFPFVAMDHARDKEHHHKMCLYNHHMPSYPSLSSSCPSLCSTATTTPSSPSPYFAAGVDPMSLACRAATATRFNGFSGDAFKSHPLHQYGVATSEASSGLMRSRFLPKLPNKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGLSDGSGEDDLSPMGSTVDRGGLRQFPNHRGQPEWAAQQDMDYSSNTTLWSNSSSCGESRLRSSSNDIDGLRSPILQSHTISGGHQNQECDSTQLKNSMAGSNLECKNPSLEFTLGRPDWNNGKEQA 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9353g00003 445 NCBIfam myb-like DNA-binding domain, SHAQKYF class 254 307 IPR006447 GO:0003677
Mupr9353g00003 445 Gene3D - 253 310 - -
Mupr9353g00003 445 MobiDBLite consensus disorder prediction 1 20 - -
Mupr9353g00003 445 SUPERFAMILY Homeodomain-like 251 307 IPR009057 -
Mupr9353g00003 445 MobiDBLite consensus disorder prediction 356 390 - -
Mupr9353g00003 445 FunFam Myb family transcription factor 252 310 - -
Mupr9353g00003 445 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 16 440 IPR044847 GO:0000976|GO:0006355|GO:0010158
Mupr9353g00003 445 MobiDBLite consensus disorder prediction 309 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9353g00003 Mupr-Chr9353 12228 17820 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9353g00003 1 438 G2-like Transcription Factor Family AT5G16560 40.546 5.46e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr9353g00003 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9353g00003 - - gmx:100796325 640.573