LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr9347g00002	ATGGTGCTTCCTCATCAGAAGCTCGTAGGATACGAAGAAGAAGTACCAGCATTACACCAGAGATTGGTGATGATATTGCAAGGATCTAATCTCTGTAGGGCTGTACGGGCAATGAGTGAAACGCTAAAGCAAAATCGTCTTATGAGAGAGCAGGGGGGTGATAGAACTAGCAGTGCAAGTCTTCAGAAAAATGTGTCAAATTTCCATCTTGATGGTCATCGTGAGAGCTCCCCCTTATATGTGCTGCGCCGTAACCCTGTATCGTCTCAAAAGGCAATGTCATTACCCTCTTCTCCGCATGATTATAGAGGACAAGCTGCTGAGAGAAGTGGGGTGTCAGAATATGCAATGCATGGTGAGCTGGAGTCTACATGGAATAAAGTCCTTGAATCATCAACGTTCTGTAATAGACCTCTGTTACCATATGAAGAATGGAATATTGATTTCTCCGAATTGACTGTTGGAACTCGAGTTGGGATCGGGTTCTTCGGAGAAGTTTTCCGTGGCATATGGAATGGCACAGATGTGGCAATCAAGGTTTTCCTAGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATTTCTATTCTAAGCCGGCTCCGACATCCTAACGTTATCTTATTTCTTGGTGCATGCACAAAGCCCCCACGCTTGTCAATGGTGACTGAATACATGGAGATGGGATCTTTGTTTTACTTGATTCACGTGAGCGGTCAAAAGAAGAAGCTTAGCTGGCGGAGAAGACTAAAGATTTTGCGGGACATATGCCGGGGCCTAATGCACATACATCGTATGAAGATTATTCACCGGGATGTGAAAAGTGCAAATTGTCTTGTGGATAAGCATTGGACGGTGAAAGTGTGTGATTTTGGACTTTCAAGAATAATAACAGAGTCTCCCATGAGAGATTCTTCGTCAGCTGGAACCCCAGAATGGATGGCCCCTGAACTTATTAGAAGTGAACCATTCACTGAAAAATGTGATATCTTTAGCCTGGGGGTGATAATGTGGGAGCTCTGCACCTTGAATAGGCCATGGGAAGGCGTACCTCCGGAGAGGGTGGTTTATGCCGTTGCTAATGAGGGTTCTCGATTGGATATTCCTGAAGGCCCGCTAGGCAGGCTGATTTCAGAGTGTTGGGCGGAACCACATGAACGTCCAAGTTGTGAGGAGATCCTCTCTCGCTTGGTGGACATCGAGTACTCGATGTCTTGA	1227	0.454	MVLPHQKLVGYEEEVPALHQRLVMILQGSNLCRAVRAMSETLKQNRLMREQGGDRTSSASLQKNVSNFHLDGHRESSPLYVLRRNPVSSQKAMSLPSSPHDYRGQAAERSGVSEYAMHGELESTWNKVLESSTFCNRPLLPYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLFYLIHVSGQKKKLSWRRRLKILRDICRGLMHIHRMKIIHRDVKSANCLVDKHWTVKVCDFGLSRIITESPMRDSSSAGTPEWMAPELIRSEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYAVANEGSRLDIPEGPLGRLISECWAEPHERPSCEEILSRLVDIEYSMS	408

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr9347g00002	408	ProSitePatterns	Protein kinases ATP-binding region signature.	158	179	IPR017441	GO:0005524
	Mupr9347g00002	408	CDD	STKc_MAP3K-like	158	400	-	-
	Mupr9347g00002	408	Gene3D	Phosphorylase Kinase; domain 1	145	230	-	-
	Mupr9347g00002	408	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	79	400	-	-
	Mupr9347g00002	408	ProSiteProfiles	Protein kinase domain profile.	152	405	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr9347g00002	408	FunFam	Serine/threonine-protein kinase isoform 1	142	230	-	-
	Mupr9347g00002	408	SMART	serkin_6	152	401	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr9347g00002	408	Gene3D	Transferase(Phosphotransferase) domain 1	231	407	-	-
	Mupr9347g00002	408	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	271	283	IPR008271	GO:0004672\|GO:0006468
	Mupr9347g00002	408	PRINTS	Tyrosine kinase catalytic domain signature	226	239	IPR001245	GO:0004672\|GO:0006468
	Mupr9347g00002	408	PRINTS	Tyrosine kinase catalytic domain signature	265	283	IPR001245	GO:0004672\|GO:0006468
	Mupr9347g00002	408	PRINTS	Tyrosine kinase catalytic domain signature	312	322	IPR001245	GO:0004672\|GO:0006468
	Mupr9347g00002	408	PRINTS	Tyrosine kinase catalytic domain signature	331	353	IPR001245	GO:0004672\|GO:0006468
	Mupr9347g00002	408	SUPERFAMILY	Protein kinase-like (PK-like)	126	400	IPR011009	-
	Mupr9347g00002	408	Pfam	Protein tyrosine and serine/threonine kinase	153	400	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr9347g00002	Mupr-Chr9347	5027	8909	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr9347g00002	10	407	MAP Kinase Kinase Kinase	AT3G58640	71.707	0.0	608

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL_CTR1-DRK-1	Mupr9347g00002		PK_Tyr_Ser-Thr	2.6e-61	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr9347g00002	-		-	gmx:100807193	705.671