Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr933g00004 ATGGAAACAGCGCTCACTTGCTTCTTCTGTGCGATACCAAAATTGGGGGCTGCAACTGCAAGTGAGCTCTTCCGTTACCGTTATAATGCCTCCGGGCACGTGCGTTTTTGTTCTCCGTTTGGCTCATTCTGCCGTTACCCTTCATTTGGAACCCATCGCCTCATTCGAAACGCCGTTAACAGCAGCAGCACCAGTGAAACTAAGGTTCCCGCGAATGCCAAAAGTAGAAGAAGACGAAGACGAAGAAGTAGCTCTGGGTCTGGGTCTGGGTCTGGGTCTTCTCAGCCACTGGCGGCGGTGGAGGAGGGTGGTGATACCACTATCCATCAGAATGGAGACCCTATTGGGAAGAAGGATCTCGGGAAGAGTGTGATGAAGTGGATTCGCGATAGCATGAAGGCGATGGCATCGGATTTAGCTGCGGCGGAGTTACAGGGAGAGTGGGAGCCGTGGGAGCGCATGGGGCCGGGTCTCACTTTTATTCTTCAAGCACAGCCATATCTGAATGTGGTTCCTATGCCCCTTGGCCTTGAAGTTCTCTGCTTCAAGGCCTGCACACACTATCCCACTCTCTTCGACCATTTTCAGAGGGAGCTTCGTGACGTTCTCCAAGACCTGCAGAGTAAGTCCTTGATTCACGACTGGCGGGACACTAAGTCTTGGAAACTGCTTAAGTACCTCGCCAATTCAGCTCAGCATAGGGCGGTTGTGAGAAAGATAACGCAGCCCAAGAGTGTCCAAGGCGTATTAGGAATGGATTTAGAGAAGGTCAAAGCAATACAGCACAGGATTGATGAATTCACCAACGGCATGTCAGAACTACTTCAAATTGAAAGGGATGCTGAATTGGAGTTTACTCAGGAGGAATTGGATGCTGTTCCTAAACCAGATGATACTTCTGATTCTTCAAAACCGATTGATTTCTTAGTTAGTCATAGCCAGACTCAACAAGAACTCTGCGACACCATTTGTAATTTAAACGCCATCAGTACCTCTACAGGTCTTCTTTTTCTCTTTTCCTTTCACACTAAGATCAAACAGCTTGGTGAAACATACTCGCAGTTTGTTTTTCGACCGAATCAGTTTGGAGTCCTAGCTGTACTGCATCTACTTTGGAGTCCGAATACTTATTTTGTCGACTTTATTGATGTTGACTCTAATTTTACTTGGTTTCTAAGTTGTTTTCTATCTATCAAATGTTTTTACCATAAAATAAAGACTCAATTTGATGTTCCAGTTTGTACTTTGCAAAGACTAGGGGGAATGCATTTGGTGTTATTCAAGGTTGAAGGGAACCACCGGTTACCACCTACCACTCTTTCACCTGGAGACATGGTTTGTGTGAGAACATGTGACAGCAGGGGTGCAATTACAACTTCTTGCATACAAGGATTTGTGAACAGTTTCGGGGATGATGGCTATAGTATTACAATTGCTTTAGAGTCACGCCATGGTGATCCTACATTCTCTAAACTATTTGGGAAGAGTGTGCGCATTGACCGTATTCAAGGACTGGCTGATACACTTACCTATGAGCGCAACTGTGAAGCGTTAATGCTGCTTCAGAAGAATGGTTTGCGAAAGAAGAATCCTTCAATTTCTGTGGTTGCTACACTGTTTGGAGATGGGGAAGATGTTGCATGGCTTGAAAAGAATCATTTGGCTGACTGGGCAGAAGAAAAATTGGATGGAAAATTAGGAAGTGAAACCTTTGATGATTCTCAGCGGAGAGCAATTGCACTGGGTTTGAATAAAAAGAGGCATGTATTGGTTATCCAAGGGCCTCCTGGTACAGGCAAAACTGGTTTGCTCAAGCAACTTATAGCATGTGCTGTTCAGCAAGGTGAAAGGGTTCTTGTTACAGCACCTACTAATGCAGCTGTTGATAACATGGTTGAAAAGCTTTCAAATGTCGGATTAAATATTGTGCGGGTTGGAAATCCAGCTCGTATATCAAAAACAGTAGGATCAAAGTCTTTGGGAGAAATTGTAAATGCTAAACTTGCAAGTTTTCGAGAAGAGTATGAGAGGAAGAAGTCAGATCTAAGAAAAGATCTAAGACATTGTTTAAGGGATGATTCACTAGCTGCGGGGATACGCCAACTTCTCAAGCAGCTGGGAAGGTCACTGAAGAAAAAGGAAAAGCAGACCATCAATGAAGTTCTATCTAGTGCTCAGGTTGTGCTTGCCACTAATACTGGAGCAGCTGACCCTTTTATTCGAAGGCTAGACACTTTTGACTTGGTTGTCATAGATGAAGCCGGACAGGCAATTGAACCCTCTTGCTGGATTCCTATATTGCAGGGAAAGCGCTGTATTCTTGCTGGTGATCAATGCCAACTTGCTCCTGTCATATTATCTAGAAAGGCCTTAGAAGGTGGTCTAGGAATATCTCTACTGGAGAGAGCTGCAACTTTGCATGAAGGGATTCTCACCACCAGGTTAACAACACAATATCGTATGAATGATGCAATTGCTAGTTGGGCTTCAAAGGAGATGTATGGAGGATTGTTGAAGTCCTCTGCGACTGTCTTCTCTCATCTTCTTGTAGACTCTCCTTTTGTTAAGCCTACTTGGATAACACAATGCCCACTGCTATTGCTAGATACTAGAATGCCATATGGAAGTCTGTCAGTTGGTTGTGAAGAGCATCTAGACCCAGCTGGAACAGGCTCGTTTTATAATGAAGGAGAAGCTGAGATAGTTTTGCAGCATGTCTTTTCCTTAATTTATGCTGGTGTTAGCCCAACTGCGATTGCAGTACAATCCCCTTATGTTGCTCAAGTACAACTTTTGAGGGACAAGCTTGATGAATTTCCAGAAGCTGCAGGTACTGAGGTTGCAACCATTGACAGTTTTCAAGGTCGGGAAGCTGATGCAGTAATTTTATCTATGGTACGATCAAACACATTGGGAGCTGTTGGATTCCTGGGGGATAGCAGAAGAATCAATGTTGCCCTCACAAGAGCACGCAAACATTTAGCTTTGGTCTGTGACAGCTCGACTATATGCCACAATACCTTCTTAGCAAGACTTCTGCGTCATATTAGACACTTTGGTAGGGTGAAGCATGCAGAACCAGGTAGTTTTGGAGGGTATGGACTTGGAATGAATCCAATATTACCTTCCATTAATTAG 3138 0.4423 METALTCFFCAIPKLGAATASELFRYRYNASGHVRFCSPFGSFCRYPSFGTHRLIRNAVNSSSTSETKVPANAKSRRRRRRRSSSGSGSGSGSSQPLAAVEEGGDTTIHQNGDPIGKKDLGKSVMKWIRDSMKAMASDLAAAELQGEWEPWERMGPGLTFILQAQPYLNVVPMPLGLEVLCFKACTHYPTLFDHFQRELRDVLQDLQSKSLIHDWRDTKSWKLLKYLANSAQHRAVVRKITQPKSVQGVLGMDLEKVKAIQHRIDEFTNGMSELLQIERDAELEFTQEELDAVPKPDDTSDSSKPIDFLVSHSQTQQELCDTICNLNAISTSTGLLFLFSFHTKIKQLGETYSQFVFRPNQFGVLAVLHLLWSPNTYFVDFIDVDSNFTWFLSCFLSIKCFYHKIKTQFDVPVCTLQRLGGMHLVLFKVEGNHRLPPTTLSPGDMVCVRTCDSRGAITTSCIQGFVNSFGDDGYSITIALESRHGDPTFSKLFGKSVRIDRIQGLADTLTYERNCEALMLLQKNGLRKKNPSISVVATLFGDGEDVAWLEKNHLADWAEEKLDGKLGSETFDDSQRRAIALGLNKKRHVLVIQGPPGTGKTGLLKQLIACAVQQGERVLVTAPTNAAVDNMVEKLSNVGLNIVRVGNPARISKTVGSKSLGEIVNAKLASFREEYERKKSDLRKDLRHCLRDDSLAAGIRQLLKQLGRSLKKKEKQTINEVLSSAQVVLATNTGAADPFIRRLDTFDLVVIDEAGQAIEPSCWIPILQGKRCILAGDQCQLAPVILSRKALEGGLGISLLERAATLHEGILTTRLTTQYRMNDAIASWASKEMYGGLLKSSATVFSHLLVDSPFVKPTWITQCPLLLLDTRMPYGSLSVGCEEHLDPAGTGSFYNEGEAEIVLQHVFSLIYAGVSPTAIAVQSPYVAQVQLLRDKLDEFPEAAGTEVATIDSFQGREADAVILSMVRSNTLGAVGFLGDSRRINVALTRARKHLALVCDSSTICHNTFLARLLRHIRHFGRVKHAEPGSFGGYGLGMNPILPSIN 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr933g00004 1045 Pfam AAA domain 571 787 IPR041677 GO:0004386
Mupr933g00004 1045 Pfam AAA domain 797 1000 IPR041679 -
Mupr933g00004 1045 Coils Coil 672 692 - -
Mupr933g00004 1045 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 570 1007 IPR027417 -
Mupr933g00004 1045 SMART AAA_5 586 801 IPR003593 GO:0016887
Mupr933g00004 1045 Gene3D - 418 505 - -
Mupr933g00004 1045 Gene3D - 506 803 IPR027417 -
Mupr933g00004 1045 SMART ultradead3 567 819 IPR014001 -
Mupr933g00004 1045 CDD SF1_C_Upf1 821 1017 IPR047187 -
Mupr933g00004 1045 MobiDBLite consensus disorder prediction 60 99 - -
Mupr933g00004 1045 CDD DEXXQc_SMUBP2 571 820 - -
Mupr933g00004 1045 FunFam DNA helicase A 819 1027 - -
Mupr933g00004 1045 Gene3D - 819 1027 IPR027417 -
Mupr933g00004 1045 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 135 1028 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr933g00004 Mupr-Chr933 45224 56338 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr933g00004 569 760 Core DNA Replication Machinery Family AT1G08840 25.773 6.99e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr933g00004 - - gmx:100799347 1202.58