Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9325g00002 TTGTTCAAGCAATGCGCGTATCCAAGCGAAACTCGACGCCGTCAAATAAGCGAGGAGCTTGGGCTTGATATTAATCAAGTAAAATTTTGGTTTCAAAATAAGAAGACACAAATGAAGACTATAAATGAGCGATTAGATAACAATGTTCTTCGGGTTGAAAATGAAAGAATACAATCAGAAAACCTCAAAATGAGAGAAGCATTGCAGAAGGTATTTTGCGTACCTTGTGGAGGTGGAGCCTTCGGAGGAGCAGAAGAGCGTGAACTTAGTTTACAAATCTTAAAGGCGGAAAATTTTCTATTAACTAAAGAGGCTAGTAAACTATTTTATTTAATT 336 0.3661 LFKQCAYPSETRRRQISEELGLDINQVKFWFQNKKTQMKTINERLDNNVLRVENERIQSENLKMREALQKVFCVPCGGGAFGGAEERELSLQILKAENFLLTKEASKLFYLI 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9325g00002 112 SUPERFAMILY Homeodomain-like 2 46 IPR009057 -
Mupr9325g00002 112 Gene3D - 1 51 - -
Mupr9325g00002 112 ProSitePatterns 'Homeobox' domain signature. 16 39 IPR017970 GO:0000981|GO:0006355
Mupr9325g00002 112 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 107 IPR042160 -
Mupr9325g00002 112 Coils Coil 42 70 - -
Mupr9325g00002 112 CDD homeodomain 2 39 IPR001356 GO:0003677
Mupr9325g00002 112 SMART HOX_1 1 45 IPR001356 GO:0003677
Mupr9325g00002 112 Pfam Homeodomain 1 39 IPR001356 GO:0003677
Mupr9325g00002 112 ProSiteProfiles 'Homeobox' domain profile. 1 41 IPR001356 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9325g00002 2 108 Homeobox Transcription Factor Family AT5G17320 47.664 6.65e-28 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mupr9325g00002 Homeodomain 1.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9325g00002 K09338 - cpap:110807286 112.849