Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr929g00001 ATGGACAGGCTCATAAGGCTAGACCCATCAAACACAGTCCTAATCAGGGTTGAAGCAGGTCAAAAGTGTCACGGCAGGATCACCTTACACAACGTGATGTACACAATGCCAGTGGCCTTCAGGCTTCAACCACTCATAAAAACGCGTTATACGGTGAAGCCCCAATCGGGGATCATATCCCCTTTAGCCACACTCACCCTAGACATCACCTACCATCTCCCACAAGGCTCCACTCTCCCCCACTTGTTCCCTCACCCGAACGACTCTTTCCTCTTGCACAGCGTCTTGGTTCCCGGCGCAGCCATCAAGGAACCCTCCTCCATGTTCGACGCTGTCCCCAGTGAGTGGTTCAAGAAGAAACAAGTTTTCATCGACAGCGGCATCAGAGTCATGTTTGTGGGGTCGCACATTCTGGCCCAACTTATAGCGCACGCTGCGATGGATGAAGCGAGAGAAGTGCTAGAGAAGAGTGACCCGTCATGGAGAGTTGTTGACTCCGCGGACCCACAAGGCCAAACGTTGCTCCACTTGGCAATTTCGCAAGGAAGAGCTGATCTCCTTCAGTTGCTCCTGGAATTCCAGCCCGACCTAGAAGCCCCAAACCGTTCTGGCTCCACCCCTCTCGAGGCTGCATCGTCCTGCAACCAAGACTTAATTGTTGAGCTTCTTTTGGCCCACAAAGCCAGCACCGAACGATCGGAACCGTCCATGTTTGGTCCGATTCATCACGCAGCAAGAGGAGGACACGTGGAGGTTATGAGACTCCTCTTACTCAAAGGTGCCAAAGTGGACTCACTCACAAAAGATGGCAACACAGCCTTGCACATTGCAGTTGAAGAGCACAGAAGAGACTGTGTTAAACTCCTTCTAGCGAACGGTGCCAGACCAGATGTTAAAAACGCAAGAGAAGGTGACACTCCTTTGCATGTGGCATCAGCAATAGGAGATGAGAGCATGGTAAAGCTCTTGCTGGAAAAGGGTGGTGCCAACAAAGACGTGAGAAACGGACAAGGAAAAACCGCATATGATGTTGCGGTGGAAAACGGGCATGCACACCTCTTTGATGCCTTGTGTTTGGGGGATAAACTAAGCGTGGCTGCAAGGAAAGGGGAAGTGAGGAGTATCCAGAAGCTTCTAGAGAATGGTGCGGGAGTCGATGGGAGGGACCAACATGGTTGGACAGCGCTGCACAGAGCCTCGTTCAAAGGGAGAATCGAGGCGGTTAAGGTTCTGGTGGAGAAAGGGGTGGACGTGGACGCGAAGGACAAAGAAGGGTACACGGCGTTGCACTGTGCTGCTGAGTCGGGGCACGCTGATGTGACAGAGTTTTTGGTGAAGAAAGGCGCTGATGTTGAAGCCAGGACTAGGAAGGGTGTGAGTGCGTTGCAAATAGCTGAGTCGTTGCACTATGTGGGGATCACGAGGGTTCTTGTTAATGGTGGGGCTAGTAGGGACCATTGTTATGTAGGTCAGGGTCAAGTGGCAGCACTTGGTGCAGTTTCGATTGGGACTAAAATGGAAGCTGGGGGTGTCATGAAGAAGAAGATCAGGGGTGGAAGAGCTAGAGTTTTAAATGGTGGTAGCTTTGATCGTTCAATGGCTTTGGCTGTG 1611 0.5177 MDRLIRLDPSNTVLIRVEAGQKCHGRITLHNVMYTMPVAFRLQPLIKTRYTVKPQSGIISPLATLTLDITYHLPQGSTLPHLFPHPNDSFLLHSVLVPGAAIKEPSSMFDAVPSEWFKKKQVFIDSGIRVMFVGSHILAQLIAHAAMDEAREVLEKSDPSWRVVDSADPQGQTLLHLAISQGRADLLQLLLEFQPDLEAPNRSGSTPLEAASSCNQDLIVELLLAHKASTERSEPSMFGPIHHAARGGHVEVMRLLLLKGAKVDSLTKDGNTALHIAVEEHRRDCVKLLLANGARPDVKNAREGDTPLHVASAIGDESMVKLLLEKGGANKDVRNGQGKTAYDVAVENGHAHLFDALCLGDKLSVAARKGEVRSIQKLLENGAGVDGRDQHGWTALHRASFKGRIEAVKVLVEKGVDVDAKDKEGYTALHCAAESGHADVTEFLVKKGADVEARTRKGVSALQIAESLHYVGITRVLVNGGASRDHCYVGQGQVAALGAVSIGTKMEAGGVMKKKIRGGRARVLNGGSFDRSMALAV 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr929g00001 537 Gene3D - 361 502 IPR036770 -
Mupr929g00001 537 ProSiteProfiles Ankyrin repeat region circular profile. 269 300 - -
Mupr929g00001 537 ProSiteProfiles Ankyrin repeat profile. 363 390 IPR002110 GO:0005515
Mupr929g00001 537 PANTHER ANKYRIN REPEAT-CONTAINING 139 357 - -
Mupr929g00001 537 ProSiteProfiles Ankyrin repeat profile. 391 423 IPR002110 GO:0005515
Mupr929g00001 537 Gene3D - 240 288 IPR036770 -
Mupr929g00001 537 Pfam Ankyrin repeats (3 copies) 240 300 IPR002110 GO:0005515
Mupr929g00001 537 Pfam Ankyrin repeats (3 copies) 156 229 IPR002110 GO:0005515
Mupr929g00001 537 Pfam Ankyrin repeats (many copies) 402 445 IPR002110 GO:0005515
Mupr929g00001 537 SUPERFAMILY Ankyrin repeat 164 486 IPR036770 -
Mupr929g00001 537 Gene3D Immunoglobulins 1 121 IPR013783 -
Mupr929g00001 537 Pfam Ankyrin repeat 304 334 IPR002110 GO:0005515
Mupr929g00001 537 Gene3D - 122 239 IPR036770 -
Mupr929g00001 537 ProSiteProfiles Major sperm protein (MSP) domain profile. 4 133 IPR000535 -
Mupr929g00001 537 ProSiteProfiles Ankyrin repeat region circular profile. 391 423 - -
Mupr929g00001 537 ProSiteProfiles Ankyrin repeat profile. 236 268 IPR002110 GO:0005515
Mupr929g00001 537 PRINTS Ankyrin repeat signature 440 454 IPR002110 GO:0005515
Mupr929g00001 537 PRINTS Ankyrin repeat signature 304 319 IPR002110 GO:0005515
Mupr929g00001 537 ProSiteProfiles Ankyrin repeat region circular profile. 424 456 - -
Mupr929g00001 537 ProSiteProfiles Ankyrin repeat region circular profile. 236 264 - -
Mupr929g00001 537 ProSiteProfiles Ankyrin repeat profile. 269 301 IPR002110 GO:0005515
Mupr929g00001 537 ProSiteProfiles Ankyrin repeat profile. 424 456 IPR002110 GO:0005515
Mupr929g00001 537 ProSiteProfiles Ankyrin repeat profile. 170 202 IPR002110 GO:0005515
Mupr929g00001 537 Gene3D - 289 359 IPR036770 -
Mupr929g00001 537 ProSiteProfiles Ankyrin repeat region circular profile. 303 327 - -
Mupr929g00001 537 SMART ANK_2a 457 486 IPR002110 GO:0005515
Mupr929g00001 537 SMART ANK_2a 236 265 IPR002110 GO:0005515
Mupr929g00001 537 SMART ANK_2a 203 232 IPR002110 GO:0005515
Mupr929g00001 537 SMART ANK_2a 337 367 IPR002110 GO:0005515
Mupr929g00001 537 SMART ANK_2a 391 420 IPR002110 GO:0005515
Mupr929g00001 537 SMART ANK_2a 269 298 IPR002110 GO:0005515
Mupr929g00001 537 SMART ANK_2a 170 199 IPR002110 GO:0005515
Mupr929g00001 537 SMART ANK_2a 424 453 IPR002110 GO:0005515
Mupr929g00001 537 SMART ANK_2a 303 333 IPR002110 GO:0005515
Mupr929g00001 537 ProSiteProfiles Ankyrin repeat profile. 303 327 IPR002110 GO:0005515
Mupr929g00001 537 SUPERFAMILY PapD-like 2 142 IPR008962 -
Mupr929g00001 537 ProSiteProfiles Ankyrin repeat region circular profile. 170 202 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr929g00001 305 485 Ion Channels AT4G32500 28.415 7.14e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr929g00001 - - gmx:100782444 920.998