Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9294g00001 ATGGCTGGATTCTTCTCTTTAGGAGGAAGGCATCACAAGGCAGAAGAGGAAGAGGATCAAAGAGAAGACAACGTTAACGCCGGTAATAGTAACAGTCAATTTTTGTTCAGGAACGAGGAGATCTACAACAAGGGATTCGAGATATGGCCACAATCCTCGTACCACCACAACATGACCAGCAACTACTACTCCTTCGGTGTGGGTCCTAGTCGCAGAAACAACAACAACAACAGCTCCTCCAACAACAACGTAAACGACGACGTTTCTGTCTCTTTCTCGGATGAGTCGAACCGGTTCGGGTTCACGGTGATGCGGTCCGGCGGCGTAGGCGGCGGCGGCGGCATGAACTGTCAGGACTGCGGGAACCAGGCGAAGAAAGACTGTTCACACCTCAGATGCAGAACCTGCTGCAAGAGTCGAGGGTTTCAGTGCCAAACGCACGTTAAGAGCACTTGGGTTCCCGCGGCCAAACGCCGTGAACGACAGCAACAACTTTCTGCGTTGCAGCAACAAAATCAACAGCCACAGTTTCGCGGAGATCATTCAAAACGACACAGAGAAAATATCGACGGTGCTGCTGCTGCTTCCCTCGCTTGCGCTCCAGTTCCTATCACCACCACAGGGTTGGAGCTGGGGCAATTTCCACCTGAGCTTAACTCTCCGGCAGTGTTTCGATGTGTGAAAGTTAGTGCAATGGATGCACCGGACGAGCGTTACGCGTATCAAACGGCTGTGAACATAGGAGGACACGTGTTCAAGGGAATTCTCTACGATCAAGGCGTGGACGGTCCTTTCGCCAGTGCAGGTTGCGAGGGTTCCTCCGGCGGTGGTGGTGAAGCTCAGCCGCTAAGTCTGATGGCCGCCACAACCACCGCCGCAACGAGCGGAAACCCTTATGACGCTTCACTCTACACGGCTCCTCTGAATGCTTTCATGGCTGGTACGCAATTCTTCCCACCCCCAAGATCCTAA 972 0.5319 MAGFFSLGGRHHKAEEEEDQREDNVNAGNSNSQFLFRNEEIYNKGFEIWPQSSYHHNMTSNYYSFGVGPSRRNNNNNSSSNNNVNDDVSVSFSDESNRFGFTVMRSGGVGGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLSALQQQNQQPQFRGDHSKRHRENIDGAAAASLACAPVPITTTGLELGQFPPELNSPAVFRCVKVSAMDAPDERYAYQTAVNIGGHVFKGILYDQGVDGPFASAGCEGSSGGGGEAQPLSLMAATTTAATSGNPYDASLYTAPLNAFMAGTQFFPPPRS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9294g00001 323 MobiDBLite consensus disorder prediction 69 89 - -
Mupr9294g00001 323 MobiDBLite consensus disorder prediction 162 177 - -
Mupr9294g00001 323 NCBIfam LRP1 C-terminal domain 213 261 IPR006511 -
Mupr9294g00001 323 NCBIfam putative zinc finger domain, LRP1 type 116 158 IPR006510 -
Mupr9294g00001 323 MobiDBLite consensus disorder prediction 9 24 - -
Mupr9294g00001 323 MobiDBLite consensus disorder prediction 159 184 - -
Mupr9294g00001 323 Pfam Domain of unknown function (DUF702) 114 262 - -
Mupr9294g00001 323 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 296 IPR007818 GO:0003700|GO:0006355
Mupr9294g00001 323 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9294g00001 Mupr-Chr9294 8975 10383 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9294g00001 1 322 C2H2 Transcription Factor Family AT1G19790 46.978 6.62e-84 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mupr9294g00001 DUF702 2e-65 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9294g00001 - - gmx:100794846 489.189