Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr928g00007 ATGGATAGAGAAAATTCTGTAATTGGTGGTGGCGGTGGCGGCGGAGAGCGTCGTGTTCGGGTCACTCGAGCAATGACTAGAGCGTTGGGAGTCTCTTCGAGACCATCCTTTAAAAAGGAAGGCAAAAACAAAGATTCTGATAAGAGCAGGGTAGTACTAGCAGATGTAACTAATACAAGCAAAATATCATTAAATAAGTATGCTGATACATCGAAATTTCAGACAAGAGCAGGTCGTAGGAAGAGAAACACAAAGGAAGCTTCGGATGTCTCCCTACAAGTTTTGTCAACGCAGGAGGATATTAGAGCAGAGTTAGGAAAAGATTTATCCACATTGACGATGGTACAGTCACATGACACTGTTGTAGGTGAAAGGCTGGAAGACAGAGAGCTACTGCAACCTTGTATGTCCAGTAGCATGAGAGGACATGTTATGGAAGGTACCCTGCTTTCAACTCAGGACTCCATGAAGTGTGATGAACTCCTGAGCTCTACAAACAAAGACATTGATATGATTTCTGAGAAACTTAAACCTTCAGATGGTTTGGGCATTGTGGACATTGATTCAGTGGAGTTAAAAGATCCTCAAGTTTGGAGTTCATATGCCCCTGATATATACAATAATATGTGTGTCAGAGAGTTTGAAAGGAGACCGTTAGCCAATTACATGGACGAGTTGCAGCAAGATATTACTCCAAGCATGCGGGGAATTCTGATTGATTGGATTGTGGAGGTTTCTGAGGAATATAAGCTAGTTCCAGACACTCTTTACCTTACAGTGAATCTCATTGATCGGTTTCTTTCTCAAAGTTTGATTCAGAAACAAAGGCTCCAGTTGCTGGGTGTTACTTGCATGCTGATTGCATCAAAGTATGAAGAGATATGTGCTCCACGAGTGGAAGAATTTTGCTTCATCACAGATAATACGTACACCAAAGCAGAGGTATTGAAAATGGAGAGTGAGGTTCTAAATCTATTGCATTTTCAATTATCTTCTCCCACCACTAAAACATTTATCAGGAGGTTCATCCTAGCTGCACATTCTTCTTACAAGGTTTCTTATGTTGAACTGGAATTCCTGGCAAATTATTTAGCAGAGCTTACTCTTGTTGAATACAGCTTCTTGCAGTTTCTACCTTCCCTGATAGCTGCATCTGCCGTATTACTTGCCAGATGGACCCTCAATCAGTCAGAACATCCATGGAATTCAACTATGGAGCACTATACAAATTACAAAGTGTCAGAACTTAAAACCACTGTTCTTGCACTGGCAGATTTGCAAGTTGATACCAGAGGCTGTTGTCTGAATGCTATACGTGAAAAATATAAACAGCACAAGTTCATGGGTGTGGCAAATTTGTCTCCGAAACCGGTGCAGTCACTTTTCCAGGCTCAAGTATAA 1401 0.4126 MDRENSVIGGGGGGGERRVRVTRAMTRALGVSSRPSFKKEGKNKDSDKSRVVLADVTNTSKISLNKYADTSKFQTRAGRRKRNTKEASDVSLQVLSTQEDIRAELGKDLSTLTMVQSHDTVVGERLEDRELLQPCMSSSMRGHVMEGTLLSTQDSMKCDELLSSTNKDIDMISEKLKPSDGLGIVDIDSVELKDPQVWSSYAPDIYNNMCVREFERRPLANYMDELQQDITPSMRGILIDWIVEVSEEYKLVPDTLYLTVNLIDRFLSQSLIQKQRLQLLGVTCMLIASKYEEICAPRVEEFCFITDNTYTKAEVLKMESEVLNLLHFQLSSPTTKTFIRRFILAAHSSYKVSYVELEFLANYLAELTLVEYSFLQFLPSLIAASAVLLARWTLNQSEHPWNSTMEHYTNYKVSELKTTVLALADLQVDTRGCCLNAIREKYKQHKFMGVANLSPKPVQSLFQAQV 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr928g00007 466 ProSitePatterns Cyclins signature. 235 266 IPR006671 -
Mupr928g00007 466 SUPERFAMILY Cyclin-like 193 330 IPR036915 -
Mupr928g00007 466 PIRSF Cyclin_A_B_D_E 16 465 IPR046965 GO:0016538|GO:0044772
Mupr928g00007 466 MobiDBLite consensus disorder prediction 1 49 - -
Mupr928g00007 466 Gene3D - 218 331 - -
Mupr928g00007 466 Pfam Cyclin, C-terminal domain 333 455 IPR004367 -
Mupr928g00007 466 PANTHER CYCLINS 163 444 IPR039361 -
Mupr928g00007 466 SMART Cyclin_C_2 333 456 IPR004367 -
Mupr928g00007 466 CDD CYCLIN_AtCycA-like_rpt2 333 447 - -
Mupr928g00007 466 SMART cyclin_7 240 324 IPR013763 -
Mupr928g00007 466 SMART cyclin_7 337 425 IPR013763 -
Mupr928g00007 466 SUPERFAMILY Cyclin-like 333 455 IPR036915 -
Mupr928g00007 466 FunFam Mitotic cyclin 6 218 318 - -
Mupr928g00007 466 CDD CYCLIN_AtCycA_like_rpt1 194 329 - -
Mupr928g00007 466 FunFam Cyclin A1 320 452 - -
Mupr928g00007 466 Gene3D - 204 452 - -
Mupr928g00007 466 Pfam Cyclin, N-terminal domain 204 331 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr928g00007 Mupr-Chr928 21345 28061 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr928g00007 19 462 Core Cell Cycle Gene Families AT5G25380 50.972 1.83e-143 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr928g00007 K06627 - gmx:100777132 697.197