Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9275g00004 ATGTTCATATTAACCATTTATGTCAAGAGCATGTTAGATTTCTCTTGTTCTAATGCAATGAAATTTCGAGGGAAAAGCTCCTTGCTATTGCTTATCCTGCTGTTCAGCACCCTTCATCTTACATGTTCTCAAACTCCTGTTTATAATTGTGTCCTTGATATTCAATTTTCTTCAGCCTTGACTAGTTCAAATTGTGAATTGTACAATTGGGGAGGGTTCATCAATGGCTGTTGTGGACTATATTTTGGTGAGTACCTATATGCCTTGGGGCTGAGGACCAACCAAACTGGAAAAATATTCTTGAATTCCTCAGAGCAAAAGAACTGTTTAGCATCAATGGAAGCTTCTGGGAAAATTTTCACTTGTTATGGGATAGAGAAGCTAACAAGTGGAGTTGGTGGTTGCTCTGATTACACCATCACAGATGTTATTAATCAGCTTGGAGACAACTTTAGGAGATTCGATGAAGATTGCATGCCTTTAAGCATAAATGGCAGGCCAAATGAAACTTGCACTAAATGTTTGAAAGCATGGGAGGATATCAGTGCAAAATCAGACAGTATAAGTGGATCAGAGTCATCAAATATCAGTGCTTACCTTTGTAGGTTTGCTGGGCTTGTTTCACTAACAAGCACAAGAATTTATGATAAGGAATCAATTCTGGAAGTTTATAAATGCCTTGGGGAACACACCCTTTCTGCAGTTAACCAAGAAGTTAAGGCAACGGGCAATATCAACTTAGGACTCTGGATTGCCTTTGGCATAACAGGAGTAACGGTGGTGGTGTTTCTTGCCGCACTAGCATTATTTGTCACAAGAACTAGAAGTGCTCCAACAGTACAAGATGGTACTCAAGACAAAGCCTTTGTGAATTTTTATGTTCCTGATTCCGAACCATCTATTTCTTTATCTTACATGGCACCGTCTAATTATCCAGAGTCTGATTCAACTTCACTGAAGATAACGTTGAAGGGTGTTTATGTAGCAACAAACAATCTTAGCGCTTCAAATTTCATAGGCCAAGGCGTAGCCGGAAAAGTGTACAAAGGTGTACTCTCCAACAACCAATATGTTGCAGTGAAACATATCACCAATGAAGGTTACATGGAGACATTTGTTAGAGAAGTGAGAAGCCTTTCCCATGTTAGACATGAAAACCTAGTAGCTTTGCTGGGATACTGTGAAAGTGAAGCTGAATGCTTCCTAGTGTATGAGCTATGCCACAATGGAAACCTCTCAGAGTGGCTATTTGGCAATGGTAAAGTTCTTTCATGGACTCAAAGACTAGAGATTGCCATTGATAGTGCAAGAGGTCTTGAGTTTCTCCACACCTACCCAAATGGTTGCATTGTTCACCGTGATGTAAAGCCATCAAACATTCTTATTGATGCTAACTTCAAAGCAAAGCTTTCAGACTTTGGGTTGTCCAGGGTTATGGACATGGGTCAGTCCTATGTGAGCTCTGAAGTAAGAGGAACATTTGGGTATATTGATCCTGAATATAGGACAAATCACCATGTAAAAGCCTCGGGAGATGTCTACAGCTTTGGAATAGTGTTATTGCAACTTCTGTCAGGACAAAGGGTCCTTAACATTGATTTCCAGAGACCGATGTCCCTGGGTAAAATGGCAAGAGATGTTGTTAGAGGCGGTGATACTTCAGAATTTGCTGATCCTAAACTCAAGGGGGACTACTCTGTTGAAGCATTTGACATAGTACTAAAGCTAGCTTTGTCTTGCATAGGGCTCAAGTGGCAAAGGCCCTCTATGGAGCAAGTGTTATATAGCCTAGAAAAGGCACTCCATATCTCATTATAA 1818 0.4037 MFILTIYVKSMLDFSCSNAMKFRGKSSLLLLILLFSTLHLTCSQTPVYNCVLDIQFSSALTSSNCELYNWGGFINGCCGLYFGEYLYALGLRTNQTGKIFLNSSEQKNCLASMEASGKIFTCYGIEKLTSGVGGCSDYTITDVINQLGDNFRRFDEDCMPLSINGRPNETCTKCLKAWEDISAKSDSISGSESSNISAYLCRFAGLVSLTSTRIYDKESILEVYKCLGEHTLSAVNQEVKATGNINLGLWIAFGITGVTVVVFLAALALFVTRTRSAPTVQDGTQDKAFVNFYVPDSEPSISLSYMAPSNYPESDSTSLKITLKGVYVATNNLSASNFIGQGVAGKVYKGVLSNNQYVAVKHITNEGYMETFVREVRSLSHVRHENLVALLGYCESEAECFLVYELCHNGNLSEWLFGNGKVLSWTQRLEIAIDSARGLEFLHTYPNGCIVHRDVKPSNILIDANFKAKLSDFGLSRVMDMGQSYVSSEVRGTFGYIDPEYRTNHHVKASGDVYSFGIVLLQLLSGQRVLNIDFQRPMSLGKMARDVVRGGDTSEFADPKLKGDYSVEAFDIVLKLALSCIGLKWQRPSMEQVLYSLEKALHISL 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9275g00004 605 ProSiteProfiles Protein kinase domain profile. 333 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr9275g00004 605 SMART serkin_6 333 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr9275g00004 605 Pfam SPARK 49 193 IPR043891 -
Mupr9275g00004 605 Gene3D Phosphorylase Kinase; domain 1 302 406 - -
Mupr9275g00004 605 Pfam Protein kinase domain 337 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr9275g00004 605 FunFam Serine/threonine kinase protein 301 406 - -
Mupr9275g00004 605 Gene3D Transferase(Phosphotransferase) domain 1 407 604 - -
Mupr9275g00004 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Mupr9275g00004 605 FunFam probable receptor-like protein kinase At5g59700 407 605 - -
Mupr9275g00004 605 SUPERFAMILY Protein kinase-like (PK-like) 309 597 IPR011009 -
Mupr9275g00004 605 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 195 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9275g00004 Mupr-Chr9275 31318 34819 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9275g00004 246 603 Receptor kinase-like Gene Family AT3G46290 38.133 2.58e-61 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Mupr9275g00004 Pkinase 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9275g00004 - - gsj:114395768 943.34