Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9267g00003 ATGAAATTAGAGGCACACCCCTCTGCTTTTGGTACTGATTTAAGTGGTGGGCCACTTTTCTTTGGAATTTTGGGTGCACTCGAGACAAGTAATCTCAAACTTTCGGGTTTTGAAACTAAAGGGTGGTGGTGGGGTTGGAGTGGGATAGTTTCACAATTTTTTGTGACTCTTTCTTTCAACATGGGAGGGGCATCACTGCCACCAGGGTTTCGTTTCCATCCAACTGATGAAGAACTAGTGGGATACTACCTTAAAAGAAAAGTGGAAGGGCTTGAAATTGAGCTTGAAGTTATTCCCGTGATTGATTTTTACAAATTCGATCCGTGGGAGTTGCCGGAGAAGTCTTTCCTTCCAAACCGGGATTTGGAATGGTTTTTCTTCTGTCCACGGGATCGCAAGTACCCAAATGGATCAAGAACAAATAGAGCTACCAAAGCTGGGTATTGGAAAGCCACTGGAAAAGACAGAAAGGTGGTGTGCCAGTCTGATCCATCCACTGTTACTGGCTACCGCAAGACCTTGGTTTTCTATCTTGGGAGGGCCCCTTTAGGAGATAGAACTGATTGGGTCATGCATGAGTATCGCCTCTCTGATGATCTTGGCCAAGCCAAACCATGTTTCCAGGGTGGTTTTGCCTTGTGCCGGGTTATTAAGAAGAATGAGAAGGCAAGTACCTCTTCACAGGTAGAACAAAAGGGAAAGAAGGCTGGAAGCAGTTCCATCAATGGGAGTGACACCTCAGTGAGATTCTCTAGTGAGCCATTCAGCATCTCTGGTGATGCTTCCTCTCAAGCAAGTCAACTGAATAATGAGAGTCGTTATTCAAGCCCTATTACTTCACCATACAATGTGGCTCCATTGGGAGAGTTTAACCAAGCTTCTGTGGAAACCAATCCTTCAAACTTCTGGATCTCCCCTGATATGATCCTTGATTCTTCAAAGGACTACCCTCAATTGAAAGATGCTGTGGCTGAATATTTTCCACGGTATGACTTACCAAGTGTGATGACACCATGGCAATCATTGGAACATCTAGAAACTTCATCTAGTTTGTCCTACTCAAATTTCAATGGGGAAGTTGAATTGGCTGATAATCTCAGTCAAATTGGCTGCATGTCACCTTACTCAAGACAGTGGAATTCCATGGACTTCTATGGAAATGGGAATTTCCCTTATGAAGGTTATGATCAAATTAACTCAATTTCACATCCAGAACACTTCTAA 1224 0.4355 MKLEAHPSAFGTDLSGGPLFFGILGALETSNLKLSGFETKGWWWGWSGIVSQFFVTLSFNMGGASLPPGFRFHPTDEELVGYYLKRKVEGLEIELEVIPVIDFYKFDPWELPEKSFLPNRDLEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCQSDPSTVTGYRKTLVFYLGRAPLGDRTDWVMHEYRLSDDLGQAKPCFQGGFALCRVIKKNEKASTSSQVEQKGKKAGSSSINGSDTSVRFSSEPFSISGDASSQASQLNNESRYSSPITSPYNVAPLGEFNQASVETNPSNFWISPDMILDSSKDYPQLKDAVAEYFPRYDLPSVMTPWQSLEHLETSSSLSYSNFNGEVELADNLSQIGCMSPYSRQWNSMDFYGNGNFPYEGYDQINSISHPEHF 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9267g00003 407 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 65 269 - -
Mupr9267g00003 407 MobiDBLite consensus disorder prediction 224 276 - -
Mupr9267g00003 407 Pfam No apical meristem (NAM) protein 67 196 IPR003441 GO:0003677|GO:0006355
Mupr9267g00003 407 SUPERFAMILY NAC domain 53 219 IPR036093 GO:0003677|GO:0006355
Mupr9267g00003 407 Gene3D NAC domain 75 225 IPR036093 GO:0003677|GO:0006355
Mupr9267g00003 407 ProSiteProfiles NAC domain profile. 66 219 IPR003441 GO:0003677|GO:0006355
Mupr9267g00003 407 FunFam Nac domain-containing protein 86 75 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9267g00003 Mupr-Chr9267 23660 26294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9267g00003 61 361 NAC Transcription Factor Family AT4G17980 55.446 1.08e-108 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr9267g00003 NAM 1.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9267g00003 - - gmx:100792714 632.098