Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9257g00002 ATGGCTGTTGCCAAGAGCAACAGCAGCAGTGAACATTCAACTTCATACAATTGTTACAAAGTATCAAGCTTGACAGAAACCATATTAGGAACAAACCAAATCTCTAATTTGAAAGATCGATATGTTCTTGGTGAGCAGTTGGGTTGGGGGCAGTTTGGTGTCATAAGAGCATGCTCTGACAAGCTGACCGGAGAGGTTTTTGCCTGCAAATCTATTGCTAAAGATAGGTTGGTTACTTCAGATGATCATCAGAGTGTTAAACTTGAGATCGAGATAATGTCCAGGTTGTCTGGGCACCCAAATGTTGTAGATCTCAAGGCAGTTTATGAAGAGGAGGAATTTGTTCATTTGGTGATGGAGCTTTGTGCTGGAGGAGAGTTGTTTCATCTGTTAGAGAAGCATGGCAGGTTTTCTGAATCTGAAGCCAGGGTTCTCTTTAGGCATCTCATGCAGATGGTTTTGTATTGTCATGAAAATGGGGTTGTTCATAGAGATTTGAAGCCTGAGAACATTCTATTGGCAACTAGATCTTCCTCGTCTCCAATTAAATTGGCTGACTTTGGGCTTGCAACCTACATCAAGCCCGGACAGAGTTTGCATGGGTTAGTTGGGAGTCCATTCTATATAGCTCCAGAGGTACTGGCAGGTGCATATAACCAGGCTGCTGATGTTTGGAGTGCAGGGGTTATTCTTTACATTCTACTGAGTGGGATGCCTCCATTTTGGGGAAAGACAAAGTCACGGATATTTGAAGCTGTTAAGACTGCTAACCTGAGGTTCCCATCTGAGCCTTGGGATTATGTTTCCGAATCAGCTAAGGATTTGATTAGGGGAATGCTCTGCACAGAATCTTCTCAAAGGCTCACTGCCAAGGAGGTTTTAGATCACCGCTGGATGGATAGCGATCAAACAAATCCTGAGCAACTACGTGTACATAAAAGTAGTAGTTGTGGAGATTGGGATGTTGGTAGCAACTCATTCTCTACCTCATTTATGCCCAGGAGTCAGGACATCAGCTTTGGTGTTGGATCTCCTACATGTGGTGCTGAATTGCCTACATTTACATGCAAATCATCATTTTCTTCCATATTTGAGGAACAAGTGACAACTTGTTCTGTTTCTGGTGGATTTTCATTTCAGAGTTCAGGTGGTTCCATTGATTTGGAATTTTCTGCTTCTGTTCCCTCAATGCCTAACTTTACATTTCTCAGCCCTAGTTCCATTGTTGAGCAAAGGGGTTGTATAGCAGAATTCCCAACTAACACACCAAATATAAATGCAATTGCTGGAGATTCTCTCCTTTGCTTTGACCATGATGTTAAAGAGATGGATTGCAAGCCTGTAGATGGTAAAAGGGCAGGTGGAACTTATGGCCATAGGACATTGGGACTGCACAACAAGAGAAACCGGACAATTGGACTGGGCGAGCGTGAGCAACTTGATCTTGTGGTGACTGAATCAGTCATTCGTTGGTCATCATGCACCCAACTTCCTACATCACCGAGATCATCTCTTTATTATTCTCTTGGGAAGGGACTTGTTAACATGAAATTATACTTTGTTGTGCCCAATAAAAGGGAAAAAAAGGTACCAGGTGAGATTCATCCAAAGCAAGACTGA 1620 0.4272 MAVAKSNSSSEHSTSYNCYKVSSLTETILGTNQISNLKDRYVLGEQLGWGQFGVIRACSDKLTGEVFACKSIAKDRLVTSDDHQSVKLEIEIMSRLSGHPNVVDLKAVYEEEEFVHLVMELCAGGELFHLLEKHGRFSESEARVLFRHLMQMVLYCHENGVVHRDLKPENILLATRSSSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGAYNQAADVWSAGVILYILLSGMPPFWGKTKSRIFEAVKTANLRFPSEPWDYVSESAKDLIRGMLCTESSQRLTAKEVLDHRWMDSDQTNPEQLRVHKSSSCGDWDVGSNSFSTSFMPRSQDISFGVGSPTCGAELPTFTCKSSFSSIFEEQVTTCSVSGGFSFQSSGGSIDLEFSASVPSMPNFTFLSPSSIVEQRGCIAEFPTNTPNINAIAGDSLLCFDHDVKEMDCKPVDGKRAGGTYGHRTLGLHNKRNRTIGLGEREQLDLVVTESVIRWSSCTQLPTSPRSSLYYSLGKGLVNMKLYFVVPNKREKKVPGEIHPKQD 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9257g00002 539 SUPERFAMILY Protein kinase-like (PK-like) 38 345 IPR011009 -
Mupr9257g00002 539 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr9257g00002 539 Gene3D Transferase(Phosphotransferase) domain 1 128 321 - -
Mupr9257g00002 539 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Mupr9257g00002 539 CDD STKc_CAMK 40 298 - -
Mupr9257g00002 539 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 307 - -
Mupr9257g00002 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Mupr9257g00002 539 Pfam Protein kinase domain 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr9257g00002 539 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Mupr9257g00002 539 FunFam Phosphoenolpyruvate carboxylase kinase 128 315 - -
Mupr9257g00002 539 FunFam Calcium-dependent protein kinase 1 43 126 - -
Mupr9257g00002 539 ProSiteProfiles Protein kinase domain profile. 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9257g00002 Mupr-Chr9257 16909 20488 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9257g00002 34 307 EF-hand Containing Proteins AT5G19360 49.635 7.30e-96 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mupr9257g00002 Pkinase 5.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9257g00002 - - gmx:100776088 780.015