Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9248g00001 ATGAATCTGCGCCAGGGCGCCAAGGTTTGGGTCCACGACAGGGATTTCGCTTGGCTTCCTGCTGAACTTCTCGAATCGTCGGGAAAGCAATTTACCGTCGCCACCGCTTCTGGCAAGAAGGTTCTTGCTCTTCCGGAGAACGTGTTTCCCAGGGATGCGGACGAAGATGAGCATGGAGGAGTCGAAGATATGACGAGGTTGGCTTACTTGAACGAGCCAGGGGTTTTGTACAATCTCCGGAGAAGATATGCGCTGAATGATATTTATACGTATACAGGGAGCATTTTAATAGCTGTTAATCCATTCGCAAAGCTTCCTCATTTATATGATATCCATATGATGGAGCAGTATAAGGGAGCTCCGTTTGGTGAGCTTAGTCCACATGTATTTGCTGTTGCCGATGCATCTTATAGAGCAATGATGAATGGAGGTCAAAGCCAATCTATCTTGGTCAGTGGTGAAAGTGGTGCTGGGAAAACTGAAACAACAAAATTGATCATGCAATATCTTACCTTTGTTGGTGGGCGTGCTGCTGGTGATGATAGAACAGTTGAACAACAAGTTCTTGAATCGAATCCACTTTTAGAGGCATTTGGCAATGCAAGGACTGTCAGGAATGACAATTCAAGCCGTTTTGGGAAGTTTGTTGAAATTCAATTTGATTCAAGTGGTAGAATATCTGGTGCTGCAATTAGAACTTACTTACTGGAAAGATCACGAGTAGTGCAGATAACGGATCCAGAAAGAAATTATCACTGCTTTTATCATTTGTGTGCATCTGAAAGGGATGTAGAGAAGTACAAGTTGGGACATCCAAGCCACTTCCATTATCTGAATCAAAGTAAAGTCTATGAATTAGATGGTGTAAGCAGTGCTGAAGAATACATGAAGACGAGGAGAGCAATGGATATTGTTGGCATAAGTCATGAGGATCAGGAAGCCATATTTTGCACCTTAGCTGCAATTTTACATTTGGGAAACATTGAATTTTCTCCTGGAAATGAGCATGACTCGTCAGTAATAAAAGATGAGAAATCAAGATTTCATTTGCAGATGTCTGCTAATCTTTTTGGGTGTGATTTGAACCTTCTGCTAGCAACATTATGTACCCGTTCGATACAAACCCGAGAAGGAAATATTGTCAAAGCTCTTGATTGTAATGCTGCTGCTGCTGGCCGGGATGCTTTGGCAAAAACTGTCTATGCTCGTTTATTTGATTGGTATGCTTATGGTCAATGCAGAATTGATAAACATATTTCTTTCATCAGACGCAGAATGATTAGGGTGAAAATACTAATTATTTGTTGTTCTACCAGGCTTGTTGATAAGATCAATAGTTCTGTCGGGCAAGATATCAATTCCCAGATGCAAATTGGAGTTTTGGATATATATGGTTTTGAGTGTTTTAAGGATAATAGTTTTGAGCAATTCTGCATCAATTTTGCAAATGAAAAGCTTCAGCAACATTTTAATCAG 1476 0.4065 MNLRQGAKVWVHDRDFAWLPAELLESSGKQFTVATASGKKVLALPENVFPRDADEDEHGGVEDMTRLAYLNEPGVLYNLRRRYALNDIYTYTGSILIAVNPFAKLPHLYDIHMMEQYKGAPFGELSPHVFAVADASYRAMMNGGQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSSGRISGAAIRTYLLERSRVVQITDPERNYHCFYHLCASERDVEKYKLGHPSHFHYLNQSKVYELDGVSSAEEYMKTRRAMDIVGISHEDQEAIFCTLAAILHLGNIEFSPGNEHDSSVIKDEKSRFHLQMSANLFGCDLNLLLATLCTRSIQTREGNIVKALDCNAAAAGRDALAKTVYARLFDWYAYGQCRIDKHISFIRRRMIRVKILIICCSTRLVDKINSSVGQDINSQMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNQ 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9248g00001 492 FunFam Myosin heavy chain 249 303 - -
Mupr9248g00001 492 Gene3D Myosin VI head, motor domain, U50 subdomain 439 450 - -
Mupr9248g00001 492 ProSiteProfiles Myosin motor domain profile. 59 492 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr9248g00001 492 SMART MYSc_2a 53 492 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr9248g00001 492 Gene3D Myosin VI head, motor domain, U50 subdomain 308 408 - -
Mupr9248g00001 492 Gene3D - 249 306 - -
Mupr9248g00001 492 PANTHER MYOSIN 51 492 - -
Mupr9248g00001 492 Gene3D Kinesin motor domain 451 466 IPR036961 -
Mupr9248g00001 492 Gene3D - 469 492 - -
Mupr9248g00001 492 Gene3D Kinesin motor domain 62 248 IPR036961 -
Mupr9248g00001 492 Pfam Myosin head (motor domain) 61 408 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr9248g00001 492 Pfam Myosin head (motor domain) 439 492 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr9248g00001 492 PRINTS Myosin heavy chain signature 193 220 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr9248g00001 492 PRINTS Myosin heavy chain signature 89 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr9248g00001 492 PRINTS Myosin heavy chain signature 457 485 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr9248g00001 492 PRINTS Myosin heavy chain signature 146 171 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr9248g00001 492 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mupr9248g00001 492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 492 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9248g00001 Mupr-Chr9248 906 5400 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9248g00001 1 492 Myosins gene family AT4G33200 73.171 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9248g00001 K10357 - gmx:100796413 862.448