Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9234g00001 ATGGAGGATCAAATCCACGGCCACACTAAAAGAATAAACCCCAATTCCCCCACGTGCTTAAAGCTCTTCGGCTTCAGCGTCCACGAAGACCTCGTAGACGATGAAGCAGAAGCAGCCGCCGTGCTCGAAGACGCGTCGGATTCAACCGCCAAGCCCACGTCACTGGACTCCGGTGGCGGCGCTGAGTTTCCGCCCTCCTCCGGCGACCGGAAATATGAGTGCCAGTACTGTTGCCGAGAGTTCGCGAACTCGCAAGCTCTCGGCGGACACCAAAACGCGCACAAGAAAGAGCGGCAACAGCTGAAGCGCGCTCAGTTACAAACGACGCGAAACGCTGCCGTTTCGTTCGTTCAGAATCCCATCATCTCTGCTTTCGCGCCTCCGCCGCACCTGCTGGCAACGCCGGGAGCCGTGGTGGTGCCGTCGGCTCCACCATCGTGGGTCTACATGCCGCCACGTGCCTCTCCTCCCCCCTTCCATGTGTCGGTTTCGCACGGGTGCGTGTTCCCCTCGACAAACAACGGCGTCAGTAACTGTAACGGTGGTAATAACTATAGCATTGTAACGGGTACGAGATCCGCAGGGGTGTTGCCGTATGTTGGCGGAGTAGGGGATACGTCGCCCGCATTTTCCACGATGGGCTTGCAAGTACAGGCCCGAGCCCACTATGGGATGGTTGATGGGCCATCTTTCAGTAGGCTCTCTAAAGGAGATGCGGGGCCCAATTTTGATAACGGTAACATTGGTGTCCACTATGGTAGTAAACCACCACACAATGCAAAGGAGAAGAAGACAGATGAGGAATAG 807 0.5663 MEDQIHGHTKRINPNSPTCLKLFGFSVHEDLVDDEAEAAAVLEDASDSTAKPTSLDSGGGAEFPPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQTTRNAAVSFVQNPIISAFAPPPHLLATPGAVVVPSAPPSWVYMPPRASPPPFHVSVSHGCVFPSTNNGVSNCNGGNNYSIVTGTRSAGVLPYVGGVGDTSPAFSTMGLQVQARAHYGMVDGPSFSRLSKGDAGPNFDNGNIGVHYGSKPPHNAKEKKTDEE 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9234g00001 268 Gene3D Classic Zinc Finger 61 120 - -
Mupr9234g00001 268 SUPERFAMILY beta-beta-alpha zinc fingers 68 99 IPR036236 -
Mupr9234g00001 268 ProSitePatterns Zinc finger C2H2 type domain signature. 74 94 IPR013087 -
Mupr9234g00001 268 PANTHER ZINC FINGER PROTEIN 5 10 172 IPR044299 GO:0010090
Mupr9234g00001 268 ProSiteProfiles Zinc finger C2H2 type domain profile. 72 99 IPR013087 -
Mupr9234g00001 268 FunFam Zinc finger protein 6 64 122 - -
Mupr9234g00001 268 MobiDBLite consensus disorder prediction 235 268 - -
Mupr9234g00001 268 MobiDBLite consensus disorder prediction 43 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9234g00001 Mupr-Chr9234 497 1980 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9234g00001 20 169 C2H2 Transcription Factor Family AT1G68360 53.371 1.13e-42 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9234g00001 - - tpra:123911684 335.109