Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9232g00004 ATGTCTTCACAGGAGTATAAGGTGGCACCGGCAGCAGCGCCGTACAACACCCCGCCGGCGCTGATAGCCTTCACCCTGGGCGTCCTGGTGGTGTGCTTCGTGGCGTTCAGCATCGTGTACTTGTGCAAGTACTGTTTCTCGAGCGTGATTCACACGTGGGCCTTCCAACGCACCGCCTCGGGTTCCCTCATTCGCCTCACGCCCCACAGGTCCCCTCCAAGGGGCCTCGACCCTTCGTTGCTCCAAGTATTCCCCACCTTCCCCTACTCCTCCGTGAAGGACCTCCGCAAGGAGAAGTACAGCCTCGAATGCGCCATCTGTTTGCTGGAGTTCGAGCACGATGACATGCTTCGTCTCTTGACCCTCTGCTGCCACGTCTTCCACCAAGACTGCATCGACCTCTGGCTCCGTTCTAACAAGACCTGCCCCGTTTGTCGCCGGGACCTCGATTCGCCCGCCGACGAAGAAACGCAAAAATCGGGGGAAGCTGTTATCCAGCTTGTAGATGAGGGCGTGGTATCGTCCGTGAGTGGCGAGACACGTATTGACGTAAGAGAAGGGGAAGAAGGCGATGGTGGTGGAAATCAAAGACAAAAAGAACGTGAATATGATGGTGAACTTGATGATGATCACGGGGTTATTCATCCAAGGTTTTTGAGGTCGCATTCCACGGGGCACTCCATAGTTTTGATTAGAGGTGAGGGGAATGAGGGGAAAGATGATGATAAGTACACGTTGAGATTGCCGGAGCATGTTTTGAGAGTGAGGCATAATAAGCATAATTGTACGAGGAGCTGTGCTAGTTACAGGGACATGACCGGGCTTGTTGCTGCTGCACCTTGTAGTAATTGTGGCTTTGTTCAACCCCTATCACCGGGCTCCTCCTCCCCTGGCCAACACTCAAAAATCTTGAATACTGCGTGTTGA 927 0.5383 MSSQEYKVAPAAAPYNTPPALIAFTLGVLVVCFVAFSIVYLCKYCFSSVIHTWAFQRTASGSLIRLTPHRSPPRGLDPSLLQVFPTFPYSSVKDLRKEKYSLECAICLLEFEHDDMLRLLTLCCHVFHQDCIDLWLRSNKTCPVCRRDLDSPADEETQKSGEAVIQLVDEGVVSSVSGETRIDVREGEEGDGGGNQRQKEREYDGELDDDHGVIHPRFLRSHSTGHSIVLIRGEGNEGKDDDKYTLRLPEHVLRVRHNKHNCTRSCASYRDMTGLVAAAPCSNCGFVQPLSPGSSSPGQHSKILNTAC 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9232g00004 308 SUPERFAMILY RING/U-box 98 152 - -
Mupr9232g00004 308 Pfam Ring finger domain 103 146 IPR001841 -
Mupr9232g00004 308 SMART ring_2 104 145 IPR001841 -
Mupr9232g00004 308 FunFam E3 ubiquitin-protein ligase ATL6 65 152 - -
Mupr9232g00004 308 MobiDBLite consensus disorder prediction 176 207 - -
Mupr9232g00004 308 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 152 IPR013083 -
Mupr9232g00004 308 PANTHER RING FINGER DOMAIN-CONTAINING 14 154 - -
Mupr9232g00004 308 CDD RING-H2_EL5-like 103 146 - -
Mupr9232g00004 308 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Mupr9232g00004 308 MobiDBLite consensus disorder prediction 181 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9232g00004 Mupr-Chr9232 14336 15262 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9232g00004 19 254 Rapid Response to Elicitors AT2G35000 36.585 2.08e-36 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9232g00004 - - gmx:100815505 432.18