Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9232g00003 ATGGATTATGCTCGCGAGGGGAACGTGGTGCAAATAATCACAGGCGGAGATGGCGGAGACAGCTGGTCCGGCGACCAGGCCGATTGGGCGACAGAGGATGAGTACCGGTTCTGGAACAACAACAACGGCGACGCGGAAACGACGCCGTCGAACTCGAATTACGAGGCACGGTCAGAGCCCCCAAGCAAGAAGTCGCGGAATTCACAGGAGGGGAGCTCAAGCCGGTCGAAGGCGATAGGGAAGATGTTCTTCAAGACGAAGCTGTGCTGCAAGTTCAGGGCAGGGACGTGCCCTTACATCACGAACTGCAATTTTGCTCACAGCATCGAAGAGCTTCGGCGCCCGCCACCAAATTGGCAGGAGATTGTGGCGGCGCATGAGGAGGAGAAGGCTGTGATGACAGAGCCAAGGGAGGAGTTTCAGATTCCCACTGTGGGGTCTTCCACCTTTGCTGGGGATATGATGCAGAGGTCCTATAAGGGAAGACATTGTAAGAAGTTTTATACAGAGGAAGGGTGTCCCTATGGGGATAGTTGCACCTTTCTTCATGATGAGCAATCGAAAAATCGTGAGAGTGTTGCTATAAGTTTGGGCCCTGGTGGTTATGCTGGTGGTAGTAGCGGCGGTGGTGGTGGTAGCGGTGGGGGTGCGGGTGGGGGTGGCAGTGGTGGTGGCGGCAGTAGCAGTGGTGTTGGTGGTGCTTCTAATGCTGCTGGTAATGGGCCTAATTCAAAGCCCTCTAATTGGAAAACCAGGATTTGCAATAAGTGGGAGATGACAGGGTATTGCCCCTTTGGCAACAAATGCCATTTTGCTCATGGTGCCACAGAGTTGCACAGATATGGAGGCGGGCTTATGGAGGGAGAAAGTAGAGATGCTGCTTCTGCGGTTGCGACCGACACAAATAAGGGAGTACCTTCAAAAGCTTCTGCTGATAATGTGGTTGCAGCGGTTACTCCTGTTACTCATTCTGATGTCTATCATATTGGAGTCCCTTCACAGAGGCCATCCATTGTGATTCAGAGGCCAGGACAGAGAACTCATCATAAGTGGAAAGGTCCGGATAAAATCAGTAGGATATATGGTGATTGGATTGATGACATCGAATAG 1110 0.5207 MDYAREGNVVQIITGGDGGDSWSGDQADWATEDEYRFWNNNNGDAETTPSNSNYEARSEPPSKKSRNSQEGSSSRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPPPNWQEIVAAHEEEKAVMTEPREEFQIPTVGSSTFAGDMMQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYAGGSSGGGGGSGGGAGGGGSGGGGSSSGVGGASNAAGNGPNSKPSNWKTRICNKWEMTGYCPFGNKCHFAHGATELHRYGGGLMEGESRDAASAVATDTNKGVPSKASADNVVAAVTPVTHSDVYHIGVPSQRPSIVIQRPGQRTHHKWKGPDKISRIYGDWIDDIE 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9232g00003 369 Gene3D - 78 114 - -
Mupr9232g00003 369 Gene3D - 242 280 - -
Mupr9232g00003 369 Gene3D - 151 199 - -
Mupr9232g00003 369 SMART c3hfinal6 83 109 IPR000571 GO:0046872
Mupr9232g00003 369 SMART c3hfinal6 248 275 IPR000571 GO:0046872
Mupr9232g00003 369 SMART c3hfinal6 158 185 IPR000571 GO:0046872
Mupr9232g00003 369 ProSiteProfiles Zinc finger C3H1-type profile. 248 276 IPR000571 GO:0046872
Mupr9232g00003 369 ProSiteProfiles Zinc finger C3H1-type profile. 83 110 IPR000571 GO:0046872
Mupr9232g00003 369 SUPERFAMILY CCCH zinc finger 157 186 IPR036855 GO:0046872
Mupr9232g00003 369 MobiDBLite consensus disorder prediction 1 76 - -
Mupr9232g00003 369 FunFam Zinc finger CCCH domain-containing protein 79 115 - -
Mupr9232g00003 369 ProSiteProfiles Zinc finger C3H1-type profile. 158 186 IPR000571 GO:0046872
Mupr9232g00003 369 SUPERFAMILY CCCH zinc finger 246 279 IPR036855 GO:0046872
Mupr9232g00003 369 MobiDBLite consensus disorder prediction 228 249 - -
Mupr9232g00003 369 SUPERFAMILY CCCH zinc finger 81 114 IPR036855 GO:0046872
Mupr9232g00003 369 FunFam Zinc finger, CCCH-type 152 190 - -
Mupr9232g00003 369 MobiDBLite consensus disorder prediction 35 58 - -
Mupr9232g00003 369 FunFam zinc finger CCCH domain-containing protein 15-like 242 281 - -
Mupr9232g00003 369 PANTHER CCCH ZINC FINGER/TIS11-RELATED 222 292 IPR045877 GO:0003729
Mupr9232g00003 369 Pfam CCCH-type zinc finger 162 184 IPR041367 -
Mupr9232g00003 369 MobiDBLite consensus disorder prediction 206 249 - -
Mupr9232g00003 369 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 84 108 IPR000571 GO:0046872
Mupr9232g00003 369 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 249 274 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9232g00003 Mupr-Chr9232 9909 12483 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9232g00003 250 278 C3H Transcription Factor Family AT1G68200 62.069 3.35e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr9232g00003 zf-CCCH 1.2e-10 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9232g00003 - - gmx:100788208 607.446