Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9230g00001 ATGTCGTCTGGGTTTTTTCTGGCAGTAATCAGGGCTCAGTTGAAGCTCTCCATTGGTTTTTGGAGGGTTTTTGTTTTCCTGAAAATTTTCACCATGCTTCGGAAACAACTGGGTTCTAGACCGAAGCAAAAGGTTCAGCACCCCTTGAGAAAGAGAAAACTGCGTATAATTTGCAACGATCCTGATGCGACTGACTCATCAGATGATGAGTCAGAGAGGATTCAGAAGCCGAGAAAAATAAAAAGAAGCGTGTGTGAGATCTCTCTTCCTCCTCTTCCTCAAACATTCATCTCTCCCGAAACCAGCTCTTGCGAGGTAAATAGCAGCAGCGATATTTTCCTTGAAGGTCAACCCCAACGTAAGAAGAGGGTTTTGCCCAAAACCCCAACAACGAGGAGGAACGCTTGTGGTAAGTACAGAGGTGTTAGGCAGAGAAAATGGGGTAAATGGGCCGCCGAGATTCGTGACCCTTTTAAGAGTGTTCGAATATGGCTCGGCACTTACAACACTGCAGAAGAGGCTTCCGAGGCCTACGAGTCCAAAAGGCAAGAGTTTGAAGCCATGGGAAAGACTCATGCTTACAAAAATGCTTCTGCTTCTGCTTCTGCTTCCGCTTCTGATAAGAGTAACTGCTGTAACTCTTCTGCTGTTGCTGCTGCGGCTGTTGCTACCGTGTCTGTTTCTGAGAAGTTTTCTACTACTTTCGATGACACTGAGAGTGCCTTGTCACACACATCACCCTCCTCTGCGCATGAGTTGGATACCTTGGCTTCCAACTCCATAAAGGATAGTAATGTTCCTGTTGAGGCTAGTGATCTGGTGGCTGAACTTGCAGGGCTAGAAATACCTGATTTGAGTCTGTTGAACTTGCCATCACCATCTTCTGTGCTTCCATCTGGGGGCTGTCTGCCAAACTTTGGACTTGATTTTGATTGGTTATCGCTTGATGAATACGGACAGGATTTTGATGATCTTGGTGGCTTCGAAGATATAAAGATTTGTGGGTTTGATGACAATGAGCCTAGTGAGCTTCCTGATTTCGATTTTGGCGATTTTGGTGCTGATGAGTTTGCTGGTTGGATTGAGGAGCCCCTCAATATACCTTGTGCCTAA 1113 0.4582 MSSGFFLAVIRAQLKLSIGFWRVFVFLKIFTMLRKQLGSRPKQKVQHPLRKRKLRIICNDPDATDSSDDESERIQKPRKIKRSVCEISLPPLPQTFISPETSSCEVNSSSDIFLEGQPQRKKRVLPKTPTTRRNACGKYRGVRQRKWGKWAAEIRDPFKSVRIWLGTYNTAEEASEAYESKRQEFEAMGKTHAYKNASASASASASDKSNCCNSSAVAAAAVATVSVSEKFSTTFDDTESALSHTSPSSAHELDTLASNSIKDSNVPVEASDLVAELAGLEIPDLSLLNLPSPSSVLPSGGCLPNFGLDFDWLSLDEYGQDFDDLGGFEDIKICGFDDNEPSELPDFDFGDFGADEFAGWIEEPLNIPCA 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9230g00001 370 SUPERFAMILY DNA-binding domain 138 185 IPR016177 GO:0003677
Mupr9230g00001 370 PRINTS Ethylene responsive element binding protein signature 139 150 IPR001471 GO:0003700|GO:0006355
Mupr9230g00001 370 PRINTS Ethylene responsive element binding protein signature 161 177 IPR001471 GO:0003700|GO:0006355
Mupr9230g00001 370 Coils Coil 168 188 - -
Mupr9230g00001 370 Pfam AP2 domain 138 187 IPR001471 GO:0003700|GO:0006355
Mupr9230g00001 370 ProSiteProfiles AP2/ERF domain profile. 138 198 IPR001471 GO:0003700|GO:0006355
Mupr9230g00001 370 CDD AP2 138 178 IPR001471 GO:0003700|GO:0006355
Mupr9230g00001 370 SMART rav1_2 138 204 IPR001471 GO:0003700|GO:0006355
Mupr9230g00001 370 Gene3D AP2/ERF domain 137 196 IPR036955 GO:0003700|GO:0006355
Mupr9230g00001 370 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 51 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9230g00001 Mupr-Chr9230 9283 10760 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9230g00001 34 369 AP2-EREBP Transcription Factor Family AT1G68550 35.530 3.12e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr9230g00001 AP2 1.6e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9230g00001 - - gmx:102660769 412.149