LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr9222g00006	ATGCCGTTGTGGTGGAGAAAGTCTTCTTCCAAAGAGGTGAAGAGGAAGGTAAACAAGGAAAGTATTATTGATACAATACAGCGGAAATTAAAGAATGCTTCTGAAGAGAAGTGCAATAATAGATCAAGAAGATCAAGGAGACATCGTGATAACGCTATCTCCAAGAAGGGATCTAGATCTCTTGCACCTACAAGATCGCCATCACCCTCCACACATGTGTCCCGCTGTCAAAGTTTTGCAGAAAGGCCTCTTTCTCAGCCACTCCCATTACCAGGATCGCACATTCCTGCTGCCGTGGATGCAAATTCTGAACTTATTTTAACATCAAAACTGGAAAGAGCCATAGGCTCTAATCCATCTCTATATTTTCCTCTTCCAAAACCTGGTTATGTAGCTAACAAGGAAGATCCTACAGATGTGGAGGGAGATATAGCTACTGCATCTGTTTCTAGTGACAGCTCAATTGATAGTGGCAATTCATTTGATTCACTGCATCTTGTTAGTCCTGTGGCATCTGACTGTGAAAATGGAAACAGAGCCACCATTAATAGTTCTTTCAGTGTGGTGCAGAAGAATCAATCACTTATTACTATCCAAAGAAACTCAAGAGCATCCTCAAAACCAGCTCCTCAATGGTGTAATAGTAAGCCTTTATCTACCTCACCAAAAGGGGTTCCTTTACATCTACAAATAGCTCGCCCAGGTGGTTTGTGCAGTGCTCCAGATAGTTCAATCTCAAGTCCTTCTAGAAGTCCAATGCGGGCATTTGGTCCTGAGCAAATGTTGAACTCTGGATTCCGGACAGGAAAGCCTTATCCAGATATAGCTTCTGGGCACTGCACTAGCCCGGTTTCAGGCCATAATTCTGGTCATAATTCAGTTGGTGGGGATTTGTCAGGACAGATGTTTTGGCCACAAAACAGGTGTAGCCCTAGCCCTGAGTGTTCTCCAATACCTAGTCCCAGAATGACAAGCCCTGGTCCCAGTTCCAGGATACAGAGTGGTACTGTGACCCCTCGGCATCCACAAGCTGGAGGTGCTGCAGCAGAAGCACCTACAAGACGTCCTGATGATGTGAAAAAACGAACTCATCAGTTACCACTTCCTCCAATAACAGTCACTACATCATGTTCGTTTTCTCCAACCTATTCTGTGTCCACAACTCCTTCAGCCCCTCGTAGTCCTTCCAGATCAGAAAATCCGACAAGCCCAGGTTCAGGCTGGAAAAAGGGGCAGTTGCTCGGAAGGGGAACGTTCGGACATGTATATCTTGGTTTTAACAGAGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTAACCCTTTATTCAGATGATGCTAAATCAAGGGAAAGCGCGCAGCAACTTGGCCAAGAAATTGCACTGCTTAGTCGGTTGCGGCATCCAAATATTGTTCAGTATTATGGATCTGAGACGGTAGATGACAAACTTTATGTATACTTGGAGTATGTCTCTGGTGGGTCAATCTATAAACTGGTTCAACAATATGGCCAGTTAGGTGAACTTGCTATTCGTAATTATACTCGACAAATTCTGTTAGGACTTGCATTTTTGCACGCTAAGAACACTGTTCACAGGGACATTAAAGGAGCAAACATATTGGTGGACCCTAATGGGCGGATAAAATTGGCAGATTTTGGGATGGCAAAACATATAAGCGGTCCATCTTGTCCATTTTCTTTCAAAGGAAGTCCTTACTGGATGGCACCTGAGGTTATAAAAAATTCAAATGGTTGTAATCTTGTGGTTGATATTTGGAGTCTGGGATGCACTGTTTTGGAGATGGCGACAACAAAACCTCCTTGGAGCCAGTACGAAGGGATTGGGAACAGCAAGGAGCTTCCTACAATTCCAGATCATCTATCAGAAGATGGAAAAGATTTTGTCAGGCTTTGTTTGCAAAGGAATCCTCTAAATCGTCCCTCAGCTGCTCAACTTCTAGAGCATCCATTTGTTAAAAATGCTATGCTGGAAAGATCCATTTTAACTGCTGTTCCTTCAGAAGCACCACCTGCTGTAATAAATGCAGTGAAATCTCTGGCCATTGGACCTGCAAAACATAATTTGTGCTTAGACTCAGAAGTGGCTGGGAACTATCCACTTAGAAGCTTGAGAACTGGTTCTGGATCAAGCAATGGACATACACCAAGGAACATCTCTTGTCCCGTTTCTCCATCTGGGGGCCTACTTTTGCCTTATAAATCATTTCATACAAGTGGAAGGATGTCTCCTTCTCCAATATCTAGCCCTCATACCGCATCTGGCTCATCTTCACCACTAACCAGTGGTGGTGGTGCTATTCCATTTCATCAGACAAAGCAACCAATATTCTCACATGAAGTTTTGGGTATGATCCAAAAGTCTCAGAATGGTTTTTATTCAAATGGGAACTCTGCTTATCAGGGGTCTAAGCATGAACAGTTGGGGAGAAATTTGCAAACTACACATGCTTGCAGCAGGGATGTAATTTCATATGATAATGATGCTCTTCCTAACCATACTAGGAGACCTGTCCAGGGAGACCCAAGAGATGGGAAGTCATACTTGGCTGATTGTGTGTCACAACAGCTGTTGAGGGATTATGTTCGGCTAAATGCATGCCTGGATCTTATGCCCAATGCCCCAAAGCCAGATCGCATTAATGACTTATGA	2670	0.4371	MPLWWRKSSSKEVKRKVNKESIIDTIQRKLKNASEEKCNNRSRRSRRHRDNAISKKGSRSLAPTRSPSPSTHVSRCQSFAERPLSQPLPLPGSHIPAAVDANSELILTSKLERAIGSNPSLYFPLPKPGYVANKEDPTDVEGDIATASVSSDSSIDSGNSFDSLHLVSPVASDCENGNRATINSSFSVVQKNQSLITIQRNSRASSKPAPQWCNSKPLSTSPKGVPLHLQIARPGGLCSAPDSSISSPSRSPMRAFGPEQMLNSGFRTGKPYPDIASGHCTSPVSGHNSGHNSVGGDLSGQMFWPQNRCSPSPECSPIPSPRMTSPGPSSRIQSGTVTPRHPQAGGAAAEAPTRRPDDVKKRTHQLPLPPITVTTSCSFSPTYSVSTTPSAPRSPSRSENPTSPGSGWKKGQLLGRGTFGHVYLGFNRESGEMCAMKEVTLYSDDAKSRESAQQLGQEIALLSRLRHPNIVQYYGSETVDDKLYVYLEYVSGGSIYKLVQQYGQLGELAIRNYTRQILLGLAFLHAKNTVHRDIKGANILVDPNGRIKLADFGMAKHISGPSCPFSFKGSPYWMAPEVIKNSNGCNLVVDIWSLGCTVLEMATTKPPWSQYEGIGNSKELPTIPDHLSEDGKDFVRLCLQRNPLNRPSAAQLLEHPFVKNAMLERSILTAVPSEAPPAVINAVKSLAIGPAKHNLCLDSEVAGNYPLRSLRTGSGSSNGHTPRNISCPVSPSGGLLLPYKSFHTSGRMSPSPISSPHTASGSSSPLTSGGGAIPFHQTKQPIFSHEVLGMIQKSQNGFYSNGNSAYQGSKHEQLGRNLQTTHACSRDVISYDNDALPNHTRRPVQGDPRDGKSYLADCVSQQLLRDYVRLNACLDLMPNAPKPDRINDL	889

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr9222g00006	889	ProSiteProfiles	Protein kinase domain profile.	408	658	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr9222g00006	889	ProSitePatterns	Protein kinases ATP-binding region signature.	414	437	IPR017441	GO:0005524
	Mupr9222g00006	889	Coils	Coil	16	36	-	-
	Mupr9222g00006	889	MobiDBLite	consensus disorder prediction	746	774	-	-
	Mupr9222g00006	889	FunFam	Mitogen-activated protein kinase kinase kinase	406	682	-	-
	Mupr9222g00006	889	PANTHER	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	54	667	-	-
	Mupr9222g00006	889	MobiDBLite	consensus disorder prediction	746	775	-	-
	Mupr9222g00006	889	MobiDBLite	consensus disorder prediction	325	340	-	-
	Mupr9222g00006	889	CDD	STKc_MEKK1_plant	408	658	-	-
	Mupr9222g00006	889	MobiDBLite	consensus disorder prediction	368	407	-	-
	Mupr9222g00006	889	MobiDBLite	consensus disorder prediction	201	220	-	-
	Mupr9222g00006	889	Gene3D	Transferase(Phosphotransferase) domain 1	406	682	-	-
	Mupr9222g00006	889	MobiDBLite	consensus disorder prediction	283	311	-	-
	Mupr9222g00006	889	Pfam	Protein kinase domain	409	658	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr9222g00006	889	MobiDBLite	consensus disorder prediction	57	74	-	-
	Mupr9222g00006	889	SMART	serkin_6	408	658	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr9222g00006	889	MobiDBLite	consensus disorder prediction	283	412	-	-
	Mupr9222g00006	889	MobiDBLite	consensus disorder prediction	31	74	-	-
	Mupr9222g00006	889	SUPERFAMILY	Protein kinase-like (PK-like)	406	721	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr9222g00006	Mupr-Chr9222	42707	48493	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr9222g00006	1	887	MAP Kinase Kinase Kinase	AT1G63700	58.324	0.0	896

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE11	Mupr9222g00006		Pkinase	8e-68	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr9222g00006	K20717		-	gmx:100814422	1285.4