Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9218g00001 ATGTGTTTGCCCGAGGGAGAGAGAGAGAGAGAGAGAGCCATGGCACTGGAAGCAGTGGTGTTTCCACAATCACAAGAGCATCACCCATTTGGATCAGTGAAGGACTTGTACAACTGCACCTTCTTGGCTTCTACTTCACCTAACTGGGGGGACTATGAACACATCAACATCAACATCAACAAAGAGAAAGAAGAAGAAGACCAAGGTTCTATCTCTACTTTTCTCGATAATAACAATAACCAACCAGATCACAATAATTACCCTTATGGAGATTGGACCAGCTCCTCCTCATCAATGCTACCCCACTTGAATGAACCTCAAGAAGCCACTTACTCCAACTTAGATAATAATACTTTAACCACTCGCCCCAAGAGGCGCAGAGCCAAAAGCAGAAAGAACAAGGAGGAAATTGAGAACCAAAGAATGACTCACATTGCTGTCGAGCGCAATAGAAGAAAGCAGATGAATGAGTATCTTTCTGTTCTTCGCTCTTTAATGCCCGACTCTTATATCCAAAGGGGTGATCAAGCTTCTATAATTGGAGGTGCTATTAACTTTGTTAAGGAGCTTGAGCAGAGGCTTCATTTTCTTGGTGCTCAGAAAGAAGGAGAGGGGAAATCTGATGCTGATGCTGCTGCTGGTGCAACAAATATGCCATTTTCTGAGTTCTTTACCTTTCCGCAGTATTCAACAGGTGCTGGTGATAATTCTGCAGCCATAGGTGAGGACGTTCAGTGTGGCATTGCTGACATAGAAGTCACCATGGTGGAAAGCCATGCAAATCTCAAAATAAGATCCAAGAAGCGCCCCAAGCAGCTCTTGAAGTTGGTCTCTGGTTTGCACACCATGTGCCTAACAATCTTGCACCTAAATGTTACCACCACTGGTGAAGTTGTTCTCTACTCCCTCAGTGTTAAGGTAGAAGATGATTGCAAGTTGGGATCGGTTGATGATATAGCTACAGCTGTGTACCAGATGCTGGATAGGATTCAGCAAGAGGCAATGGGTGGAGAAGGCTGTGGTCTTGTCTACCTCAGGCAAAAGCCAAAGCCAAATTGTCAAGCTGAAATTGATAACATCTCAAAA 1086 0.442 MCLPEGERERERAMALEAVVFPQSQEHHPFGSVKDLYNCTFLASTSPNWGDYEHINININKEKEEEDQGSISTFLDNNNNQPDHNNYPYGDWTSSSSSMLPHLNEPQEATYSNLDNNTLTTRPKRRRAKSRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYIQRGDQASIIGGAINFVKELEQRLHFLGAQKEGEGKSDADAAAGATNMPFSEFFTFPQYSTGAGDNSAAIGEDVQCGIADIEVTMVESHANLKIRSKKRPKQLLKLVSGLHTMCLTILHLNVTTTGEVVLYSLSVKVEDDCKLGSVDDIATAVYQMLDRIQQEAMGGEGCGLVYLRQKPKPNCQAEIDNISK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9218g00001 362 MobiDBLite consensus disorder prediction 71 119 - -
Mupr9218g00001 362 Pfam Helix-loop-helix DNA-binding domain 140 191 IPR011598 GO:0046983
Mupr9218g00001 362 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 139 190 IPR011598 GO:0046983
Mupr9218g00001 362 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 139 202 IPR036638 GO:0046983
Mupr9218g00001 362 PANTHER MAX DIMERIZATION, MAD 68 335 - -
Mupr9218g00001 362 SMART finulus 145 196 IPR011598 GO:0046983
Mupr9218g00001 362 MobiDBLite consensus disorder prediction 63 135 - -
Mupr9218g00001 362 Gene3D - 124 204 IPR036638 GO:0046983
Mupr9218g00001 362 CDD bHLH_AtFAMA_like 142 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9218g00001 Mupr-Chr9218 4994 6752 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9218g00001 14 307 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 46.497 7.12e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr9218g00001 HLH 9.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9218g00001 - - pvu:PHAVU_007G181900g 520.776