Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9217g00002 ATGGCTTTCTTTATTTTCTTCTTCCTTCTTGCTTCATCTGCCACTGCTTGCGATCGCTGCGTGCACCAATCCAAGGCTGCCTATTTCTCCAAAGCTTCTGCCCTTTCATCTGGGGCCTGTGGGTATGGATCATTGGCACTAGACATTAGTGGTGGACAACTTGCAGCTGGTGTGGCTTCCCTCTTCAAAAATGGAGCCGGTTGTGGTGCCTGCTTTCAGATAAGGTGCAAGAACCCAATTCTTTGCTCCAAAGAGGGTACCAGAGTGGTATTGACTGATCTTAATCACAATAATCAAACTGACTTTGTGCTCAGCAGCAGAGCCTTTGCGGCCATGGCTCAGAAGGGTATGGCCCAACAAGTTTTGAAGCTTGGCATTGCTGACATTGAATACAAGAGAGTACCTTGTGATTACAAAAAACAGAATTTGGCCATCCGTGTGGAAGAATCAAGCAAGAAACCTGATTACTTAGCAATTAAATTTTTGTATCAAGGGGGTCAAACGGAGATAGTAGCCGTTGATGTGGCTCAGGTGGGATCTTCAAACTGGAGCTTCATGAGCAGAAACCACGGGGCAGTGTGGGACACAAGCAGGGTACCCCAAGGTGCATTGCAATTTCGATTAGTGGTAACGGCAGGATATGATGGGAAGTGGATTTGGGCACAGAAGGTCCTACCTGTTGATTGGAAAAATGGAGTGGTCTATGACACTGGCCTTCAGATAACAGACATTGCACAAGAGGGCTGTTCCCCTTGCGATTATGGGACATGGTCCTGA 777 0.471 MAFFIFFFLLASSATACDRCVHQSKAAYFSKASALSSGACGYGSLALDISGGQLAAGVASLFKNGAGCGACFQIRCKNPILCSKEGTRVVLTDLNHNNQTDFVLSSRAFAAMAQKGMAQQVLKLGIADIEYKRVPCDYKKQNLAIRVEESSKKPDYLAIKFLYQGGQTEIVAVDVAQVGSSNWSFMSRNHGAVWDTSRVPQGALQFRLVVTAGYDGKWIWAQKVLPVDWKNGVVYDTGLQITDIAQEGCSPCDYGTWS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9217g00002 258 SUPERFAMILY Barwin-like endoglucanases 6 139 IPR036908 -
Mupr9217g00002 258 FunFam Expansin-like A2 10 137 - -
Mupr9217g00002 258 SUPERFAMILY PHL pollen allergen 142 236 IPR036749 -
Mupr9217g00002 258 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 37 141 IPR007112 -
Mupr9217g00002 258 FunFam Expansin-like A2 138 242 - -
Mupr9217g00002 258 Gene3D - 10 137 IPR036908 -
Mupr9217g00002 258 CDD DPBB_EXLA_N 12 138 - -
Mupr9217g00002 258 Gene3D - 138 242 IPR036749 -
Mupr9217g00002 258 PANTHER EXPANSIN-B3 10 240 - -
Mupr9217g00002 258 PRINTS Major pollen allergen Lol pI signature 113 128 IPR005795 GO:0005576|GO:0019953
Mupr9217g00002 258 PRINTS Major pollen allergen Lol pI signature 146 161 IPR005795 GO:0005576|GO:0019953
Mupr9217g00002 258 PRINTS Major pollen allergen Lol pI signature 56 67 IPR005795 GO:0005576|GO:0019953
Mupr9217g00002 258 PRINTS Major pollen allergen Lol pI signature 76 86 IPR005795 GO:0005576|GO:0019953
Mupr9217g00002 258 PRINTS Major pollen allergen Lol pI signature 162 177 IPR005795 GO:0005576|GO:0019953
Mupr9217g00002 258 PRINTS Major pollen allergen Lol pI signature 213 230 IPR005795 GO:0005576|GO:0019953
Mupr9217g00002 258 Pfam Lytic transglycolase 55 131 IPR009009 -
Mupr9217g00002 258 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 155 237 IPR007117 -
Mupr9217g00002 258 Pfam Expansin C-terminal domain 144 226 IPR007117 -
Mupr9217g00002 258 PRINTS Expansin/Lol pI family signature 223 237 IPR007118 GO:0005576
Mupr9217g00002 258 PRINTS Expansin/Lol pI family signature 58 76 IPR007118 GO:0005576
Mupr9217g00002 258 PRINTS Expansin/Lol pI family signature 124 140 IPR007118 GO:0005576
Mupr9217g00002 258 PRINTS Expansin/Lol pI family signature 36 54 IPR007118 GO:0005576
Mupr9217g00002 258 PRINTS Expansin/Lol pI family signature 183 197 IPR007118 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9217g00002 Mupr-Chr9217 15009 16629 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9217g00002 14 258 Expansin Gene Family AT4G38400 66.397 4.17e-112 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9217g00002 - - gmx:100819849 476.092