Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9213g00003 ATGCGTTCCAGCAACGGTAACACTTATGCTGCTGCATCTAGCAGCAGAGCCTCCAACGGTAACACTGGGCGCCACCCTGTGTACCGCGGAGTGAGGCGTAGGAGTAGTGGCAAATGGGTTTCTGAAATCCGTGAGCCCAAAAAGCCCAACAGGATTTGGTTAGGGACATTTGCTACCCCTGAAATGGCTGCTATTGCCTATGACGTGGCAGCGCTTGCTCTTAAGGGTAAGGATGCTGAACTCAACTTCCCTAACTCGGCTTCTTCTCTTCCTGTCCCTGCTTCATCCGCTGCTCGTGATATTCAGATGGCTGCTGCTAGTGCTGCAGCTGCTGTTGGAGCAGCGAATGATGCACTCGAGGGAAGCCGAGGAGGGAATGTTTCGGTTTCATTGGCACAAGAATTTTCAGGGGGGAATTTAAACCACTTTGTGGATGAGGACTTGATCTTTGATATGCCGAATATTCTGGTCAATATGGCTGAAGGAATGTTACTCAGCCCTCCTCGTTTTGACATTGCTGCTAGTGCCAGTGACTATGACTACATGGATGAAGATCCTAACCTCTGGGCTGGTAGATTTGCTGGTGCTCCTTAG 594 0.5034 MRSSNGNTYAAASSSRASNGNTGRHPVYRGVRRRSSGKWVSEIREPKKPNRIWLGTFATPEMAAIAYDVAALALKGKDAELNFPNSASSLPVPASSAARDIQMAAASAAAAVGAANDALEGSRGGNVSVSLAQEFSGGNLNHFVDEDLIFDMPNILVNMAEGMLLSPPRFDIAASASDYDYMDEDPNLWAGRFAGAP 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9213g00003 197 CDD AP2 28 86 IPR001471 GO:0003700|GO:0006355
Mupr9213g00003 197 MobiDBLite consensus disorder prediction 1 22 - -
Mupr9213g00003 197 ProSiteProfiles AP2/ERF domain profile. 27 84 IPR001471 GO:0003700|GO:0006355
Mupr9213g00003 197 PRINTS Ethylene responsive element binding protein signature 66 86 IPR001471 GO:0003700|GO:0006355
Mupr9213g00003 197 PRINTS Ethylene responsive element binding protein signature 28 39 IPR001471 GO:0003700|GO:0006355
Mupr9213g00003 197 SMART rav1_2 27 90 IPR001471 GO:0003700|GO:0006355
Mupr9213g00003 197 MobiDBLite consensus disorder prediction 1 41 - -
Mupr9213g00003 197 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 22 189 IPR045277 GO:0003700
Mupr9213g00003 197 FunFam Ethylene-responsive transcription factor 2 26 85 - -
Mupr9213g00003 197 Pfam AP2 domain 26 76 IPR001471 GO:0003700|GO:0006355
Mupr9213g00003 197 SUPERFAMILY DNA-binding domain 27 86 IPR016177 GO:0003677
Mupr9213g00003 197 Gene3D AP2/ERF domain 27 85 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9213g00003 Mupr-Chr9213 45138 46057 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9213g00003 17 189 AP2-EREBP Transcription Factor Family AT2G36450 62.921 1.60e-58 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mupr9213g00003 AP2 1.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9213g00003 - - gmx:100813781 303.138