Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9194g00002 ATGAACGACCTATTCTCAAACTCGTTCAAAAAATACAGCGACCTGAAGCAGCAGGCGTACCTGGATGACGTGGAGGCGGGGAAGGAGAGCGTGAATCTGGATAAATTCTTCGAGGACGTTGAGAACGTGAAGGAAGAGATGCGAGACGTGGAGAAGCTATACAGAAAGCTGCAGGAGACGAACGAGGAGAGCAAGACAGCGCACACAGCGAAAGCTATGAAGGAGCTTCGGTCGCGGATGGATAGAGAGGTGGAGCAGGTGCTGAAGCGCGTTAAAGTGATAAAAGGGAAGCTGGAGGCATTGGACCGGTCCAACGCGGCCAACCGGAACATTCCCGGATGCGGACCGGGTTCGTCGGCGGACCGGACGAGAACGTCTGTGGTGAGCGGATTGGGGAAGAAACTGAAGGACATGATGGACGATTTCCAGGGGCTGAGGGCGAGGATGCAGATGGAGTACAAGGAGACGGTGGAGCGGCGTTACTTCACCATCACCGGAGAGAAGGCCGATGAGGATACGATCGAGAAGTTGATATCGAGCGGGGAGAGTGAGAGTTTTTTGCAGAGGGCGATTGAGGAGCAGGGGAGGGGTCAGATCATGGACACTATATCCGAGATTCAAGAAAGGCATGATGCCGTTAAGGAGATTGAGAAGAACCTGATTGAGCTTCATCAGGTATTTTTGGACATGGCTGCTCTAGTTGAGTCTCAGGGGCAGCAGCTCAATAGCATCGAGAGCCAAGTGGCCCATGCTAGTTCCTTCGTCAGACGTGGCACCGAGCAGCTTCAGGAGGCTCGTGAGTACCAGAAGAGTTCCCGCAAGTGGACCTGCTATGCCATTCTTCTTGGCATTTTGCTTCTTGTTGTATTGCTCTTTCCTCTCTTTACCTCCCTTTTGCCTCATTTGTTAAGGAAGAGAACAACTGGAAACACCAATACAATATCGTTGTAA 951 0.5195 MNDLFSNSFKKYSDLKQQAYLDDVEAGKESVNLDKFFEDVENVKEEMRDVEKLYRKLQETNEESKTAHTAKAMKELRSRMDREVEQVLKRVKVIKGKLEALDRSNAANRNIPGCGPGSSADRTRTSVVSGLGKKLKDMMDDFQGLRARMQMEYKETVERRYFTITGEKADEDTIEKLISSGESESFLQRAIEEQGRGQIMDTISEIQERHDAVKEIEKNLIELHQVFLDMAALVESQGQQLNSIESQVAHASSFVRRGTEQLQEAREYQKSSRKWTCYAILLGILLLVVLLFPLFTSLLPHLLRKRTTGNTNTISL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9194g00002 316 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 203 265 IPR000727 -
Mupr9194g00002 316 CDD SNARE_syntaxin1-like 202 264 - -
Mupr9194g00002 316 ProSitePatterns Syntaxin / epimorphin family signature. 209 248 IPR006012 GO:0005484|GO:0006886|GO:0016020
Mupr9194g00002 316 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 30 160 - -
Mupr9194g00002 316 SUPERFAMILY t-snare proteins 32 258 IPR010989 GO:0016020|GO:0016192
Mupr9194g00002 316 Pfam SNARE domain 240 291 IPR000727 -
Mupr9194g00002 316 Gene3D - 30 162 - -
Mupr9194g00002 316 SMART tSNARE_6 198 265 IPR000727 -
Mupr9194g00002 316 Gene3D - 196 295 - -
Mupr9194g00002 316 CDD SynN 33 190 IPR006011 GO:0016020
Mupr9194g00002 316 PANTHER SYNTAXIN 41 285 IPR045242 -
Mupr9194g00002 316 Pfam Syntaxin 35 238 IPR006011 GO:0016020
Mupr9194g00002 316 FunFam Syntaxin 132 196 296 - -
Mupr9194g00002 316 Coils Coil 33 67 - -
Mupr9194g00002 316 SMART SynN_4 28 154 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9194g00002 Mupr-Chr9194 8516 9586 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9194g00002 1 303 SNARE and Associated Proteins AT1G61290 77.558 3.30e-178 493