Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9188g00001 ATGGTCGTAATTGAGAATTGTGAAGACAAGGTTGGCACAAACAACGGCACCGTGAGCAACAACATTGACGTTGTTGAAGAATATCCTGAAAATGTTCAAACAAAGCAAGATTCGATGGCACGAAGAGTGAGTCAACGACTTGAAAAGCGACCTAGGAAATACTGGGGCAATGATAAGGAGAAGAGGCTAATTAGTGGTACTGATGGGAACCATTTTATTCTAAAGAGAAAAACCAAACTCGCGAATGTTCCTTTCGTGAAACAAGAAGGAGCATTGGTTAGCGTAGGTGAAAGCAGTGTAAGTGATACAAGCTCTGATTCAAATGACTCTGAAGTGGCACGTGTGGCTGGTGGAGAAGATAACAATAATGATTCAATTATGTTCGATGAGCTGGACTTTAGAGGCGCTCTAAGGATAAGAGAAACGTTGAGACGCGCCAATGGGGTTAATGTTGGGAAACCCTTGCCTGCATTAAGGGGATCTAAGAAACTTTTAGAGAAGATTCGAGGAATCGCAAGAAATGTACATGAGGTTATTAATGATATCTGTTTTTCTTTAACCATGCAACAGGTCAAGAATTTAGATTTTGTTCTCAAAAATTTTCATCACTGTTTCACCGACCTCAGCAACGGTCTAGAAGCTATACCCATTCCAGTTACTAATGAGGTTGATGACCCTCCTATTGCACCTCCTGCCTTTACATATGTCACATCTACCCTAGTTGCAAACAACGTGGAAGTTCCATCTAGTGATGGCTATGGGTGCCAGTGCGAAGGAAGTTGTAGAACTAGCAAGACTTGTTGTGCTAAACTTAATAACAAGTTTCCATATACTCGTCGTCGGAATTGTAGCAGATTGATCAAAGCTAAAGATATTGTATTTGAATGTGGTCCAAATTGTGGATGTGGACCTGACTGTGCCAATAAAGTATCTCAGAAGGGTTTACAGTACCGGCTTGAGGTCGTTTTTCGTACGCCTAACAAAGGATGGGGTGTTAGATCATGGGATTTTATTCCTTTTGGAGCTCTAGTGTGTGAATATGTAGGTCTACTTCGGAGAAGTGAAGACCTTAACGATGCTATAAACAATGACTTCTTATTTGATATTGACTGTTGGGAAAGAATCAAGGGCTTAGGTGGACGAAAGAGACGGTTGCCTAATGAACCATTGCCTGAAAAAATTTTACATGAAAAAGAGGAGGAAGACTCGATGAAAACTGAGCCTGAATTTTGTGTAGATTCTAGCTCTTTTGGCAATGTGTCTCGGTTCATCAACCACAGTTGTATACCGAACCTCTTTGTGCAGTGTGTTCTGAGCTCACACTATGGACTGAAACAAGCTCGAATTGCACTTTTTGCAGGAAAAGAAATTCGTCCCAACACAGAACTTACATATGACTATAGTTACCAACTTGATAGTGTTGTTGATGCGGATGGAAATATCAAGCATTCACCGTGTTACTGTGGTGAAGTTAATTGTCGCAAGCGTTTATACTAG 1497 0.4088 MVVIENCEDKVGTNNGTVSNNIDVVEEYPENVQTKQDSMARRVSQRLEKRPRKYWGNDKEKRLISGTDGNHFILKRKTKLANVPFVKQEGALVSVGESSVSDTSSDSNDSEVARVAGGEDNNNDSIMFDELDFRGALRIRETLRRANGVNVGKPLPALRGSKKLLEKIRGIARNVHEVINDICFSLTMQQVKNLDFVLKNFHHCFTDLSNGLEAIPIPVTNEVDDPPIAPPAFTYVTSTLVANNVEVPSSDGYGCQCEGSCRTSKTCCAKLNNKFPYTRRRNCSRLIKAKDIVFECGPNCGCGPDCANKVSQKGLQYRLEVVFRTPNKGWGVRSWDFIPFGALVCEYVGLLRRSEDLNDAINNDFLFDIDCWERIKGLGGRKRRLPNEPLPEKILHEKEEEDSMKTEPEFCVDSSSFGNVSRFINHSCIPNLFVQCVLSSHYGLKQARIALFAGKEIRPNTELTYDYSYQLDSVVDADGNIKHSPCYCGEVNCRKRLY 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9188g00001 498 MobiDBLite consensus disorder prediction 97 118 - -
Mupr9188g00001 498 MobiDBLite consensus disorder prediction 97 111 - -
Mupr9188g00001 498 SMART set_7 317 474 IPR001214 GO:0005515
Mupr9188g00001 498 SUPERFAMILY SET domain 193 474 IPR046341 -
Mupr9188g00001 498 Gene3D SET domain 198 498 IPR046341 -
Mupr9188g00001 498 ProSiteProfiles SET domain profile. 317 468 IPR001214 GO:0005515
Mupr9188g00001 498 Pfam SET domain 329 467 IPR001214 GO:0005515
Mupr9188g00001 498 Pfam Pre-SET motif 209 309 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mupr9188g00001 498 ProSiteProfiles Post-SET domain profile. 482 498 IPR003616 -
Mupr9188g00001 498 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 189 490 - -
Mupr9188g00001 498 ProSiteProfiles Pre-SET domain profile. 253 314 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mupr9188g00001 498 SMART preset_2 205 301 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9188g00001 Mupr-Chr9188 1868 7665 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9188g00001 207 498 EF-hand Containing Proteins AT5G13960 53.898 1.42e-105 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mupr9188g00001 SET 5.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9188g00001 - K11420 gmx:100783066 459.144