Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9180g00001 ATGGCAACTATGCTGGCAAAGGAGAATGGTCTGAACCTGAAGGAGACTGAGCTTTGCCTCGGTTTGCCTGGCGGTGGCGGCGGTGTTGGTGGTGGCGGCGGCGGCTCCGAGGTGGAAACTCCAAGGGCCACTGGGAAGAGAGGCTTCTCTGAGACAGTTGATCTCAAGCTTAATCTTCAATCCAAGGAAGATCTGAATGAGAATTTGAAGAATGTCTCAAAGGAGAAGACCCTCCTTAAGGATCCTGCCAAGCCACCGGCTAAGGCTCAAGTGGTTGGTTGGCCACCAGTGAGATCATACAGGAAGAACATGATGGCACCGAAGGTTAGCACTGAGGAAGGAGCTGAGAAGACAACAAGCAGCACTGCTTCTGGGGCATTTGTCAAAGTTTCCATGGATGGAGCACCTTACCTTCGCAAGGTGGACCTCACAATGTACAAAAGCTACAAAGAGCTATCTGATGCCTTAGCCAAAATGTTCAGCACCTTCACCACGGGTAACTATGGGGCCCAAGGAATGATAGACTTCATGAATGAGAGCAAGTTGATGGATCTTCTTAACAGCTCTGAGTATGTGCCAACCTATGAAGATAAGGATGGCGACTGGATGCTCGTGGGTGATGTCCCATGGGAGATGTTTGTTGAGTCATGCAAGCGCCTGCGAATAATGAAAGGATCAGAAGCGATTGGGCTTGCGCCAAGAGCAATGGAAAAATGCAAAAGCAGAAGCTGA 732 0.4986 MATMLAKENGLNLKETELCLGLPGGGGGVGGGGGGSEVETPRATGKRGFSETVDLKLNLQSKEDLNENLKNVSKEKTLLKDPAKPPAKAQVVGWPPVRSYRKNMMAPKVSTEEGAEKTTSSTASGAFVKVSMDGAPYLRKVDLTMYKSYKELSDALAKMFSTFTTGNYGAQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKSRS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9180g00001 243 Gene3D - 120 237 - -
Mupr9180g00001 243 FunFam Auxin-responsive protein 120 235 - -
Mupr9180g00001 243 Coils Coil 55 75 - -
Mupr9180g00001 243 Pfam AUX/IAA family 43 234 IPR033389 -
Mupr9180g00001 243 SUPERFAMILY CAD & PB1 domains 122 224 - -
Mupr9180g00001 243 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 230 IPR003311 GO:0005634|GO:0006355
Mupr9180g00001 243 ProSiteProfiles PB1 domain profile. 125 225 IPR000270 GO:0005515
Mupr9180g00001 243 MobiDBLite consensus disorder prediction 24 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9180g00001 Mupr-Chr9180 882 3024 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9180g00001 105 228 B3 DNA Binding Superfamily AT3G61830 31.452 9.91e-10 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mupr9180g00001 AUX_IAA 3.3e-83 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9180g00001 K14484 - gmx:100810762 417.542