Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9172g00001 ATGGCGATATCCAATAGCAGGCAAAGGAACATGCCGTCTATGGAAGATAGAGAAAGGGGTGAAAGCCTGGCGTATCCTGAAGCTGTTCTCTTAACTCATCCATCTAATCAACAGTTTAAAGACGAGGTGGATGACAAATACCAATACTCGAGTGAGAACAAAGATAACTCTGTTCATGGTTGGATTACCGAAGATAATTTAGCGCCTGAAGGATTCTGGATGATAACGCCCAGTAATGAGTTCCGCAATGCTGGGCCCATTAAACAAGACCTCACCTCTCATGTTGGCCCAATTTTTGTCTACCATAACTCTGCTCCAAATAGAGCTCAGTTTCGATCTCTGTGGTCAGATGCCGTAGAACAGGTGCCTATTATTACCCTTAAGGCCCTAACCACACCCTCACCTGTGATATTATTGTTCAGGGCTTATGTTATGACATAG 441 0.4399 MAISNSRQRNMPSMEDRERGESLAYPEAVLLTHPSNQQFKDEVDDKYQYSSENKDNSVHGWITEDNLAPEGFWMITPSNEFRNAGPIKQDLTSHVGPIFVYHNSAPNRAQFRSLWSDAVEQVPIITLKALTTPSPVILLFRAYVMT 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9172g00001 146 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 98 - -
Mupr9172g00001 146 Gene3D - 17 112 IPR014718 GO:0030246
Mupr9172g00001 146 Pfam Rhamnogalacturonate lyase family 1 43 IPR010325 -
Mupr9172g00001 146 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9172g00001 Mupr-Chr9172 1542 2057 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9172g00001 1 98 Polysaccharide Lyase AT2G22620 73.469 5.06e-44 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9172g00001 K18195 - gmx:100781089 195.667