Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9171g00001 ATGATTGGAAACTTCATCGACGACATTGACTGCGGTAGCTTCTTCGACCACATCGACGACCTTCTCGAATTCCCCGCCGAAGACGCCGCCGACACCTCCGCCGCCGCCGCCGCGCCGGTCGCCCCTTCGGCGAACTTCTGGTCCGCTGAGTCCGACTCCCTGCCCGCCGTCAACGCTGTGTTTTCCGGCGACGCCGTGCCGGACCTCTCAGCGGAGCTCTCCGTTCCGTATGAAGACATTGTGCAATTGGAATGGCTGTCTAATTTTGTTGAGGACTCTTTCTCTGGTGGGAGCCTGACCATGAAGAAAGAGGAAGCACCATGCACCACCACCACCACCAAGGAGGACATAGCTCATGCACAATTCCAGACATCAAGCCCAGTCTCTGTCCTCGAAAGCAGCAGTTTCTGCTCAGGGGAGAAGGCTGCGCCTCGCAGCCCGGAGGTTTACATCCCCGTGCCGTGTGGGCGTGCACGCAGCAAGCGTCCACGCCCTGCAGCTTTCAACCCTCATCCAGTGATGCAGCTCATCTCCCCTGCATCCTCCACCGGTGAGAACACGCAGCCTAATCCCACCACTTCCAAGGCCTCGTCGGATTCTGAGAACTTCGCCGAGTCTCATCCAGCGATCAAGAAGAAAAAGAAGATGAAGGTGTGTTTGTCATCAAGCCAGGAGCAGAATGCTGCACCATCACAAGCAGTTAGGAAATGCTTGCACTGTGAGATAACCAAGACACCACAGTGGAGGGCCGGGCCGATGGGGCCGAAAACACTCTGCAATGCTTGTGGCGTGCGCTACAAGTCAGGCAGGCTGTTCCCCGAATACCGTCCGGCGGCGAGTCCAACGTTCTGCGCGGCCGTTCACTCCAACTCCCATAAGAAGGTCATTGAAATGAGAAACAAGACAGGCACCAAATCTGGCTTTGCAACTGATTCAGCTGCCACACCAGAACTTATTCCAAACACCAACAGCAGCCTCTCCCTGGAATACATGTGA 996 0.5643 MIGNFIDDIDCGSFFDHIDDLLEFPAEDAADTSAAAAAPVAPSANFWSAESDSLPAVNAVFSGDAVPDLSAELSVPYEDIVQLEWLSNFVEDSFSGGSLTMKKEEAPCTTTTTKEDIAHAQFQTSSPVSVLESSSFCSGEKAAPRSPEVYIPVPCGRARSKRPRPAAFNPHPVMQLISPASSTGENTQPNPTTSKASSDSENFAESHPAIKKKKKMKVCLSSSQEQNAAPSQAVRKCLHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCAAVHSNSHKKVIEMRNKTGTKSGFATDSAATPELIPNTNSSLSLEYM 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9171g00001 331 Gene3D - 231 281 IPR013088 GO:0006355|GO:0008270
Mupr9171g00001 331 PANTHER GATA TRANSCRIPTION FACTOR 15 314 - -
Mupr9171g00001 331 MobiDBLite consensus disorder prediction 175 204 - -
Mupr9171g00001 331 FunFam GATA transcription factor 225 312 - -
Mupr9171g00001 331 Pfam GATA zinc finger 237 270 IPR000679 GO:0006355|GO:0043565
Mupr9171g00001 331 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 235 294 - -
Mupr9171g00001 331 SMART GATA_3 231 281 IPR000679 GO:0006355|GO:0043565
Mupr9171g00001 331 CDD ZnF_GATA 236 283 IPR000679 GO:0006355|GO:0043565
Mupr9171g00001 331 PIRSF Txn_fac_GATA_plant 2 325 IPR016679 GO:0003677|GO:0005634|GO:0045893
Mupr9171g00001 331 ProSiteProfiles GATA-type zinc finger domain profile. 231 267 IPR000679 GO:0006355|GO:0043565
Mupr9171g00001 331 ProSitePatterns GATA-type zinc finger domain. 237 262 IPR000679 GO:0006355|GO:0043565
Mupr9171g00001 331 MobiDBLite consensus disorder prediction 160 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9171g00001 Mupr-Chr9171 3911 7449 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9171g00001 18 301 C2C2-Gata Transcription Factor Family AT4G32890 35.786 3.74e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr9171g00001 GATA 1e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9171g00001 - - gmx:100792644 536.569