Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9162g00012 ATGTCGGCCTATATTGATAGAGTTCATGCTGCCCTTCATGACTTTAATGAACTTTTATCTTTTGCTGCCACTAGTCCTTATTTTGCTACTTGTGACCAGATTTTGGGTGACTTCCTGAGCCTCTTACTGCTCCTCTACATGGTGACACCTCTACTTTTTCCTTCTAGAGTAGCAATCAAGGTTTGTTATCTGAATAAAGTAAATGGCAGTGATGTTACATACACTGATGGCAATGGAACAGACTCAGGTGAGGTGAAAACAGAGTCATTTAGAAAGATCAAAGCTAGTGAAATGACTTGTATGGCTTCTAACATTGACCTTGATGAATGGGGCGAAACAAGCATCCCCAACACTTCATCCAGGACTGGTAGCAGCTCTAATCATTCTTCTTCCACTCATTCCTGGAACCCTACAAGTCATTTCCTTTCTCAGTTTAGCCTCATCCCTGGTAATGTAAACTTCAGACTTAGCAGAACCACCAGTTTGGGGTCATCAAGGCATTGTCCTGTTTCTTCTGCAAGTCTCTCAATATTTGACAATGGAGATGAGCATAATCTCCATCCTGGATCTCCTGGAAGCTTGATTAACAGAAGTGAAACACAACAATGTAGTAACTTGCTTCCTGCATCTTTTTTCAATCAAATACATGTAGAATGTCAAGAAGATGCTTCTAGTAATTTAAGGTCAAATGTTCTGACATCAGGTGTACATGGAAACTTGCCAAGCAGTCCCTTGGGTGAAGCTTGTACAAGAGAAGGGCTGGATGTGAACTTATTTTCTCCGAGAATTCAAAGAGAGACAGAAAATGTTGACACTAGACATATTGATCAACGGAATGGAGCTCGAGAACCAGTTGAACGGAATATTCATTTTAGCCGAACTTTAAGTGTTGGAAGGCTTCGTGACAGAGTTCTTCGTCAATCAACATTATCTGACCTCACCTTTTGCCCTCTGCAACAAGAGACAGAGCTGAGAGATGCTAGCATGCTTAGCCAGGATATTGGAAGGCAAGTAGTGGAGGGAGATTCAAGAGTGTCACCATCTGATCATAGTGCCATCAATTCTTCTTCTACATCTGGATACCCTCCTTCTAGTATGTCTAACTCCATGTTTAGCATCCAAGACTATGACGTTGAGACTTCACGGTTGAGAGAAGGTAGGTATCAGGATCTACTGGAACATAGGTCCAATTTCCTTGAGCGGAGAAGAAGAATACGGTCCCAGGTTCGTGCTCTTCAGCGGCTGGGGAGCCGGTTTGAAAATCTTTCTGGACATGATAGATCGTGTATCTTGTCTGGACAACATCGAAATGGTTGTTGTACATGCCAAATCAGTAATCGTGACACTAATTCAAATGATGATACCAGTGCTAGAGCTAGCATATCAAGAATTGTTATGCTTGCTGAAGCCTTATTTGAGGTTCTGGATGAGATTCACCAGCAATCTGTTGTTTTGTCTTCCCGCCCTTCTGTATCTTCTATTGGATCTGTTCCTGCACCTAATGATGTTGTGGAGTCCTTGCCTGTCAAATTATATGAGAAGTTGCATAAGCATCAAGAGGATGCTGCACAATGCTATATATGCCTAGTGGAGTATGAGGATGGAGACAACATGCGAGTATTGCCGTGCCATCATGAATTTCATAGAACATGTGTAGACAAGTGGTTGAAGGAGATTCACAGGGTATGCCCGCTTTGTCGGGGGGACATATGTATATCTGATTCATCGCCAACAGAGAACTCAAGTGGC 1749 0.4248 MSAYIDRVHAALHDFNELLSFAATSPYFATCDQILGDFLSLLLLLYMVTPLLFPSRVAIKVCYLNKVNGSDVTYTDGNGTDSGEVKTESFRKIKASEMTCMASNIDLDEWGETSIPNTSSRTGSSSNHSSSTHSWNPTSHFLSQFSLIPGNVNFRLSRTTSLGSSRHCPVSSASLSIFDNGDEHNLHPGSPGSLINRSETQQCSNLLPASFFNQIHVECQEDASSNLRSNVLTSGVHGNLPSSPLGEACTREGLDVNLFSPRIQRETENVDTRHIDQRNGAREPVERNIHFSRTLSVGRLRDRVLRQSTLSDLTFCPLQQETELRDASMLSQDIGRQVVEGDSRVSPSDHSAINSSSTSGYPPSSMSNSMFSIQDYDVETSRLREGRYQDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCILSGQHRNGCCTCQISNRDTNSNDDTSARASISRIVMLAEALFEVLDEIHQQSVVLSSRPSVSSIGSVPAPNDVVESLPVKLYEKLHKHQEDAAQCYICLVEYEDGDNMRVLPCHHEFHRTCVDKWLKEIHRVCPLCRGDICISDSSPTENSSG 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9162g00012 583 MobiDBLite consensus disorder prediction 340 368 - -
Mupr9162g00012 583 MobiDBLite consensus disorder prediction 347 368 - -
Mupr9162g00012 583 SUPERFAMILY RING/U-box 503 573 - -
Mupr9162g00012 583 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 488 571 IPR013083 -
Mupr9162g00012 583 ProSiteProfiles Zinc finger RING-type profile. 525 567 IPR001841 -
Mupr9162g00012 583 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 65 579 - -
Mupr9162g00012 583 FunFam Putative RING zinc finger domain superfamily protein 494 572 - -
Mupr9162g00012 583 SMART ring_2 525 566 IPR001841 -
Mupr9162g00012 583 Pfam Ring finger domain 524 567 IPR001841 -
Mupr9162g00012 583 MobiDBLite consensus disorder prediction 111 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9162g00012 Mupr-Chr9162 26751 31874 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9162g00012 251 576 C3H Transcription Factor Family AT5G45290 60.060 9.40e-116 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9162g00012 - - gmx:100800896 829.32