Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9147g00002 ATGTCAAGCAATGCATTAACTTTTTTTATCTTGTTTCTTAATATCTCCTTGTTTCCAGCCACCTCTGCTCTAAACCAGGAAGGTCTCTCTCTACTTTCATGGCTCTCAACATTCAACTCCTCTGACTCTGTCACTGCCTTTTCATCATGGGATCCAACCCACCAGAGTCCATGCAGATGGGACTACATAAAATGTTCCAAAGAAGGGTTTGTTTCAGAGATCATAATAGCATCCATTGATCTTCACACCACCTTCCCTACACAGCTTCTTTCTTTTGGAAACCTAACCACTCTAGTAATCTCAAATGCAAACCTCACAGGTGAGATTCCCAGGTCAGTGGGAAACTTGTCATCATCACTGGTTACTTTGGACCTCAGCTTCAATGCTTTATCAGGAACTATTCCATCTGAAATAGGGAAGTTATACAAGCTGCAGTGGCTATATCTGAACTCAAATTCCCTGCAAGGTGGAATTCCATCACAAATTGGAAACTGTTCAAAGCTGAGGCAGCTGGAAGTGTTTGATAACCAGCTCTCCGGCTTGATTCCGGGAGAAATAGGGCAGTTGAGGGATCTTGAAACGCTTAGAGCAGGTGGGAACCCAGGCATCCATGGTGAAATTCCTATGCAGATATCAAACTGCAAGGGTCTAGTTTATCTAGGCCTTGCAGACACTGGGATATCAGGGGAGATTCCACCAACTATAGGAGAACTTACAAGTCTCAAGACACTTCAAATCTACACTGCACACCTCACAGGTCACATCCCACCAGACATTCAAAACTGCTCAGCCTTGGAGGAGTTGTTTCTCTATGAAAACCAGCTTTCTGGAAACATTCCTCATGAGTTGGGTTCCATGAAAAGCCTCAGAAAGGTTATGCTGTGGCAGAATAATTTCACTGGAACAGTTCCAGAAAGTCTGGGGAACTGTACAAGCCTGAGAGTTGTAGATTTTTCTATGAATTCATTGGTTGGTGAACTTCCTGTGAGTCTCAAAAGTCTAGTATTATTGGAGGAGCTTCTTTTGTCTAATAATAACATTTCTGGAGTGATACCTTCCTATATTGGCAACTTCTCCAGTCTGAAGCAACTGGAATTGGATAATAACAGATTCTCTGGGGAGATTCCACCTGTCTTGGGACAACTGAAGGAACTCACCTTGTTCTATGCCTGGCAGAATCAGCTCCACGGAAGGATACCAACAGAACTCTCCAACTGTGAGAAACTTCAAGCACTTGATCTTTCACATAATTTCCTCACTGGGTCCATTCCAAGTTCACTATTTCATCTAGAGAATTTAACTCAGTTATTGTTGTTATCAAATAGACTTTCAGGTCAAATTCCTCCAGATATTGGTAGTTGCACCAGCTTGATCAGGCTAAGGTTGGGATCAAACAACTTCACTGGTCAAATTCCACCACAAATAGGCTTTTTAAGGAGATTGAGCTTTCTTGAATTGTCAGATAATTTGCTCAGTGGAGATATTCCCTTTGAGATAGGTAACTGTGCCAAGCTGGAGATGCTTGACTTTCACAGCAATGAGTTGCAAGGAGCAATTCCTTCCTCATTAGAATTCTTGGTTGGTCTCAATGTCTTGGATCTTTCTGCAAACAGAATAACTGGCGGCATCCCTGAAAATTTAGGCAAGTTAGCATCTCTAAATAAGTTGATACTCAGTGGAAACCATATCACTGGTTTGATGCCTAAGTCACTTGGCCTTTGCAAGGCTTTGCAGTTGCTTGACATAAGCAGCAATAGGATCAGTGGTTCCATTCCTGATGAGATTGGGCACTTGCAAGAATTGGATATCCTCTTGAACTTGAGTTGGAATTCTTTAACAGGCCCCATCCCAGAGACCTTCTCAAATCTCTCAAAACTTTCCAACTTGGACCTCTCTCACAACAAGCTCACAGGGAGTCTCAGAGTACTGGGTAGTCTTGACAATCTAGTGTCTCTTAATGTCTCCTACAATAGTTTCTCTGGCTCTCTTCCTGATACAAAGTTCTTCAGGGATCTTCCTCCTGCTGCATTTGCTGGCAACCCTGACCTATGTATTACCAAGTGTCAAGCAAGTGGACATCACCAAGGCATCAAGTCAATAAGAAACATTATCATATACACTTTCCTTGGTGTTATCTTCACTTCAGGGTTTGTTACTTTTGGAGTAATCTTAGCCCTCAAAATTCAAGGGGGCACTAATTTGGACAGTGAAATGCAATGGGCTTTCACTCCATTTCAAAAACTCAACTTCTCCATCAATGACATCATCCCAAAGTTATCAGACTCAAACATTGTGGGAAGGGGTTGCTCGGGAATCGTTTACCGTGTGGAGACTCCAATGAACCAGGTTGTTGCAGTGAAGAAGCTGTGGCCACCAAAGCATGATGAGCCACCAGAGAGAGACCTTTTTGCTGCAGAAGTTCACACCCTTGGATCAATAAGGCACAAAAATATAGTGAGACTTTTAGGATGCTACAACAATGGAAGAACTAGATTGCTCTTGTTTGACTACATATGCAATGGGAGTTTGTCTGGATTGCTCCATGAAAATAGTTTGTTCTTGGACTGGGATGCAAGATATAAGATCATTCTGGGAGCAGCTCATGGTTTGGAATATCTTCATCATGATTGTATCCCTCCAATCATCCATAGAGACATTAAGGCTAACAACATCTTGGTAGGTCCACAATTTGAAGCTTTTCTTGCAGATTTTGGCCTCGCAAAACTTGTTGGTTCCTCAGATTATTCCGGAGCCTCTGCTATAGTTGCAGGTTCCTATGGATACATAGCTCCTGAATATGGATACAGTTTAAGGATCACAGAGAAGAGTGATGTGTACAGTTTTGGTGTGGTGCTCATTGAGCTCTTAACAGGGATGGAGCCAATAGATAGCCGGATTCCAGAAGGTTCCCACATTGTCCCATGGGTTATCAGGGAAATCAGAGAGAAGAAAAGAGAGTTTACATCAATTCTGGACCAGAAACTAGCACTGCAGTGTGGAACACAAATCCCTGAGATGCTTCAAGTGCTAGGGGTGGCTCTCTTATGTGTGAATCCATCCCCAGAAGAAAGACCTGCCATGAAAGATGTGACAGCAATGCTCAAGGAGATCAGACATGAAACTGTGGATTTTGACTTTGAGAAGTCAAATCTTCTACACAAAGGAGATGTCACCAATCCAAAAGCAGCAGTTCAGTGTCCAAGCTTCTCCAGATCTTGTAAACCTCTAACTGAATCACCTTCTTCATCAGTGTCACCAAATTAG 3264 0.4259 MSSNALTFFILFLNISLFPATSALNQEGLSLLSWLSTFNSSDSVTAFSSWDPTHQSPCRWDYIKCSKEGFVSEIIIASIDLHTTFPTQLLSFGNLTTLVISNANLTGEIPRSVGNLSSSLVTLDLSFNALSGTIPSEIGKLYKLQWLYLNSNSLQGGIPSQIGNCSKLRQLEVFDNQLSGLIPGEIGQLRDLETLRAGGNPGIHGEIPMQISNCKGLVYLGLADTGISGEIPPTIGELTSLKTLQIYTAHLTGHIPPDIQNCSALEELFLYENQLSGNIPHELGSMKSLRKVMLWQNNFTGTVPESLGNCTSLRVVDFSMNSLVGELPVSLKSLVLLEELLLSNNNISGVIPSYIGNFSSLKQLELDNNRFSGEIPPVLGQLKELTLFYAWQNQLHGRIPTELSNCEKLQALDLSHNFLTGSIPSSLFHLENLTQLLLLSNRLSGQIPPDIGSCTSLIRLRLGSNNFTGQIPPQIGFLRRLSFLELSDNLLSGDIPFEIGNCAKLEMLDFHSNELQGAIPSSLEFLVGLNVLDLSANRITGGIPENLGKLASLNKLILSGNHITGLMPKSLGLCKALQLLDISSNRISGSIPDEIGHLQELDILLNLSWNSLTGPIPETFSNLSKLSNLDLSHNKLTGSLRVLGSLDNLVSLNVSYNSFSGSLPDTKFFRDLPPAAFAGNPDLCITKCQASGHHQGIKSIRNIIIYTFLGVIFTSGFVTFGVILALKIQGGTNLDSEMQWAFTPFQKLNFSINDIIPKLSDSNIVGRGCSGIVYRVETPMNQVVAVKKLWPPKHDEPPERDLFAAEVHTLGSIRHKNIVRLLGCYNNGRTRLLLFDYICNGSLSGLLHENSLFLDWDARYKIILGAAHGLEYLHHDCIPPIIHRDIKANNILVGPQFEAFLADFGLAKLVGSSDYSGASAIVAGSYGYIAPEYGYSLRITEKSDVYSFGVVLIELLTGMEPIDSRIPEGSHIVPWVIREIREKKREFTSILDQKLALQCGTQIPEMLQVLGVALLCVNPSPEERPAMKDVTAMLKEIRHETVDFDFEKSNLLHKGDVTNPKAAVQCPSFSRSCKPLTESPSSSVSPN 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9147g00002 1087 ProSiteProfiles Leucine-rich repeat profile. 625 647 IPR001611 GO:0005515
Mupr9147g00002 1087 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 838 1051 - -
Mupr9147g00002 1087 ProSiteProfiles Leucine-rich repeat profile. 408 430 IPR001611 GO:0005515
Mupr9147g00002 1087 ProSiteProfiles Protein kinase domain profile. 759 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr9147g00002 1087 Pfam Leucine Rich Repeat 408 430 IPR001611 GO:0005515
Mupr9147g00002 1087 Gene3D Phosphorylase Kinase; domain 1 736 837 - -
Mupr9147g00002 1087 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 408 692 - -
Mupr9147g00002 1087 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 201 326 - -
Mupr9147g00002 1087 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 24 200 - -
Mupr9147g00002 1087 Gene3D Ribonuclease Inhibitor 140 228 IPR032675 -
Mupr9147g00002 1087 Pfam Leucine rich repeat 288 347 IPR001611 GO:0005515
Mupr9147g00002 1087 Pfam Leucine rich repeat 552 612 IPR001611 GO:0005515
Mupr9147g00002 1087 SUPERFAMILY RNI-like 82 396 - -
Mupr9147g00002 1087 Gene3D Ribonuclease Inhibitor 423 521 IPR032675 -
Mupr9147g00002 1087 Gene3D Ribonuclease Inhibitor 604 692 IPR032675 -
Mupr9147g00002 1087 Gene3D Ribonuclease Inhibitor 326 422 IPR032675 -
Mupr9147g00002 1087 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Mupr9147g00002 1087 Pfam Protein kinase domain 762 1030 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr9147g00002 1087 SUPERFAMILY Protein kinase-like (PK-like) 739 1034 IPR011009 -
Mupr9147g00002 1087 SMART LRR_typ_2 334 357 IPR003591 -
Mupr9147g00002 1087 SMART LRR_typ_2 286 310 IPR003591 -
Mupr9147g00002 1087 SMART LRR_typ_2 526 549 IPR003591 -
Mupr9147g00002 1087 SMART LRR_typ_2 623 645 IPR003591 -
Mupr9147g00002 1087 SMART LRR_typ_2 358 382 IPR003591 -
Mupr9147g00002 1087 SMART LRR_typ_2 478 502 IPR003591 -
Mupr9147g00002 1087 SMART LRR_typ_2 430 454 IPR003591 -
Mupr9147g00002 1087 SMART LRR_typ_2 646 679 IPR003591 -
Mupr9147g00002 1087 SMART LRR_typ_2 550 573 IPR003591 -
Mupr9147g00002 1087 SMART LRR_typ_2 141 165 IPR003591 -
Mupr9147g00002 1087 Gene3D Ribonuclease Inhibitor 29 139 IPR032675 -
Mupr9147g00002 1087 PRINTS Leucine-rich repeat signature 623 636 - -
Mupr9147g00002 1087 PRINTS Leucine-rich repeat signature 409 422 - -
Mupr9147g00002 1087 ProSitePatterns Serine/Threonine protein kinases active-site signature. 881 893 IPR008271 GO:0004672|GO:0006468
Mupr9147g00002 1087 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 386 1035 - -
Mupr9147g00002 1087 ProSitePatterns Protein kinases ATP-binding region signature. 765 788 IPR017441 GO:0005524
Mupr9147g00002 1087 Gene3D Transferase(Phosphotransferase) domain 1 838 1054 - -
Mupr9147g00002 1087 SMART serkin_6 759 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr9147g00002 1087 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 735 837 - -
Mupr9147g00002 1087 Gene3D Ribonuclease Inhibitor 522 603 IPR032675 -
Mupr9147g00002 1087 Gene3D Ribonuclease Inhibitor 229 325 IPR032675 -
Mupr9147g00002 1087 SUPERFAMILY L domain-like 405 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9147g00002 Mupr-Chr9147 24746 28399 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9147g00002 23 1073 Receptor kinase-like Gene Family AT5G56040 46.927 0.0 933
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mupr9147g00002 Pkinase 1.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9147g00002 - - gmx:100814382 1983.76