Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9129g00001 ATGAGTTCATCCACTGCTCCAAATCCATGGACAGGAAAGGACTGTTCAGTGAAAATCTGCAGCCTCTATTGCCCCCAGTGGTGTTACATACTCTACCCTCCTCCTCCTCCTCCTCCGCTCCTCTTTCGCGACGCCGACGACGACGACGACGCCTTTCAATTCTCTCCTCTCGTTGTTGCCGTCATTGGAATTCTCGCCAGCTCTTTCATCTTGGTCACTTACTACGCCGTCATCTCGCGGTTCTGCCGGCGTCAACCCGATCGCGACGAGGGGAGTAGCGAGCTGGCTCAGGTTTCTTCTTCCGCAAATTCCGGCCTGGACGAGGCTCTGATAAAGTCAATAGCGGTATGCAAGTACAGCAAGGGCGGCGTGGTGGAGAGTCGAGACTGTTCGGTGTGTTTGAGCGAGTTTGAAGAGAATGAGAGCTTGAGATTGTTGCCCAAATGTAACCATGCCTTTCATCTTCCCTGCATTGACGCTTGGCTTAAGTCTCACGCCACGTGTCCTCTCTGTCGTTCCACCATTGCTCCCAATCCATCCATGGAACCGCCTCCCACCATTGTCATTAATGCCTTTCAATACTGCCAACGGAGTAGCCAAATTGTTGTCATTGTTCAGAGCTCCGAGCAACAACACACCCTTCTTAGTTTTGCTGCCCCCAAGATCCAGCTATGA 675 0.523 MSSSTAPNPWTGKDCSVKICSLYCPQWCYILYPPPPPPPLLFRDADDDDDAFQFSPLVVAVIGILASSFILVTYYAVISRFCRRQPDRDEGSSELAQVSSSANSGLDEALIKSIAVCKYSKGGVVESRDCSVCLSEFEENESLRLLPKCNHAFHLPCIDAWLKSHATCPLCRSTIAPNPSMEPPPTIVINAFQYCQRSSQIVVIVQSSEQQHTLLSFAAPKIQL 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9129g00001 224 FunFam E3 ubiquitin-protein ligase ATL6 94 178 - -
Mupr9129g00001 224 Pfam Ring finger domain 129 172 IPR001841 -
Mupr9129g00001 224 CDD RING-H2_EL5-like 129 172 - -
Mupr9129g00001 224 ProSiteProfiles Zinc finger RING-type profile. 130 172 IPR001841 -
Mupr9129g00001 224 SMART ring_2 130 171 IPR001841 -
Mupr9129g00001 224 SUPERFAMILY RING/U-box 110 188 - -
Mupr9129g00001 224 PANTHER RING-H2 FINGER PROTEIN ATL16 46 199 IPR044600 GO:0016567|GO:0016740
Mupr9129g00001 224 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 178 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9129g00001 Mupr-Chr9129 1027 1701 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9129g00001 1 182 C3H Transcription Factor Family AT3G03550 49.533 3.90e-61 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9129g00001 - - gmx:102660020 293.893