Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mupr9121g00003 | ATGGACATGACTTCCTCAGGTGGTTCCTCCTGTTGGCTTTATGATTATGGCTTTGACATCTCTGTTGCTGCTGCTGATTTCATGGCTGCAGACTCTGCTGGTTTTAGTTGGGGGCCTCAGAGTCACACCTTCAAGGCTCCTTCACATACGAGCTTGGAAATGGAATACTCACTGGATTCAACTGTCCTGGAAAATGGTCCTTCTAAACGGTTAAGGACTGAATCATGTGCATCTGGCTCCAAGGCATGTCGTGAGAAATTGCGAAGGGATAAACTGAATGAGAGGCATGCTATTAAATTTGCATCTTGTCTGATTGAGTTTAGTCTTATAAATCTCATGTTTCTGGAACTGAGTTCTATCTTGGAGCCTGGTAGGCTGCCCAAAACAGACAAAGTTGCAATATTAAGTGACGCGGGTCGAGTGGTAATCCAATTAAGAAATGAAGCCGAGAGGCTGAAGGAAATGAATGATGAATTACTGGAAAAAATTAAAGATCTAAAGACTGAGAAGAACGAGCTTCGTGATGAGAAGAATAGGCTGAAGGAAGAGAAAGAAAAGTTGGAGCAGCAGGTAAAATTGGCAAATGTACATCCCAGCTTTCTACCTCAAGTCTCAGCTGCTAAAGGACAAGTTGGTAGCCACAAGCTGATACCTTTCATTGGATACCCTGGAATTGGCATGTGGCAGTTTATGCCCCCTGCTGCAGTTGATACATCAAAGGATCATCTGCTTCGACCTCCAGTTGCATAA | 750 | 0.4373 | MDMTSSGGSSCWLYDYGFDISVAAADFMAADSAGFSWGPQSHTFKAPSHTSLEMEYSLDSTVLENGPSKRLRTESCASGSKACREKLRRDKLNERHAIKFASCLIEFSLINLMFLELSSILEPGRLPKTDKVAILSDAGRVVIQLRNEAERLKEMNDELLEKIKDLKTEKNELRDEKNRLKEEKEKLEQQVKLANVHPSFLPQVSAAKGQVGSHKLIPFIGYPGIGMWQFMPPAAVDTSKDHLLRPPVA | 249 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mupr9121g00003 | 249 | CDD | bHLH_AtILR3_like | 81 | 174 | - | - | |
| Mupr9121g00003 | 249 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 110 | 169 | IPR036638 | GO:0046983 | |
| Mupr9121g00003 | 249 | Gene3D | - | 135 | 195 | - | - | |
| Mupr9121g00003 | 249 | Coils | Coil | 135 | 197 | - | - | |
| Mupr9121g00003 | 249 | PANTHER | BHLH TRANSCRIPTION FACTOR | 2 | 249 | IPR044818 | GO:0003700|GO:0006355|GO:0006879|GO:0046983 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mupr9121g00003 | Mupr-Chr9121 | 27636 | 29587 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mupr9121g00003 | 34 | 249 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT5G54680 | 51.982 | 6.91e-69 | 210 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mupr9121g00003 | - | - | gmx:100806838 | 361.688 |