Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9113g00004 ATGGGTGCACCAGAAGTTTCCAGATGTGGAAGAAGAAGGAGAAGAATGGCTGGTAAAAGTTCAATTACTCAGACAGCAACCAGACATGGCTCTCACAAACTGAGCAAATTTGATCTAGCTGATCTAGAATGGACCAATAGGATTCCAGAGTGTCCAATATACCATCCATCAGACCATGAGTTTGAGCATCCTTTACTTTATCTGCAGAAGATTGCTCCTGAGGCTTCTAAATATGGTATATGCAAAATTGTTTCTCCAATTGCAGCCTCTAATCCAGCTGCTTTTGTCTTAATGAAAGAGAAAAAAGATTTCAAGTTTGAAACAAATGTACAGCCTCTTCGACTTTCTAAATGGAATGAAAAGGACACAGTAACATTTTCTATGAGAGGAAGAAAATACACCTATCATGAATTTGAGGCTCTTGCAAACAAGGCATTTTTCAGTAGATTTCACTGTTGTGGAGATCTTCCTTCTTCATATGTGGAAAAGGAGTTCTGGCATGAGATGGTGCATGGAGAGAAGGGAACAGTTGAGTATGGAGTCAATGTTGAGGGTAGTGCCTTTTCATGTGACCCTGATGACAGGCTCGGAACAAGCAAATGGAATTTAAAGGTTTTCTTCAGACTTCATGCTGACCCCATTCATTTAAGAGTTCTCTTAACATCTGCACTCTTGCAACTGAACTTCTCACGGCTGCTGCAGTCTCCATTGCGTTTAGTTGAAAGGGAAATTCCAGGCATAACTGATCCCATGCTTTACATTGGGATGCTGTTCAGTATGTTCGCATGGCATGTAGAAGACCATTATTTGTACAGTATAAATTATCATCACTCGGGTGCAAATAAAACTTGGTATTGTGTGCCTGGCTATGCAGCCTCACAACTTGAAAAGACTGTCTTACATCATGTGTATTGCAATAAGATCTTAACAAAACATGGAGAGGATGGAGCTTTCAAGTTTCTTGCACTAAAAACAACCATGTTCCCTCCAAATGTCCTGTTACAACACGATGTGGCAGTTTACAAGGCTGTACAGAAGCCGGGAGAGTTTGTTATCACCTTTCCTAGAGCATATCATGCTGGATTTAGTCATGGTTTTAACTGTGGAGAAGCAGTAAACTTTGCTATTGGTAATTGGTTTCCACTTGGGGCAGCAGCTAGCGGGCGTTATGCACATCTGAGAATGATGCCTTTAATTCCATATGAGGAACTTCTTTGTAAAGAGGCAATGTTGGTTTACAAGTCCTCAAAAGTCAGAAGGTCCAAGAACAAACCCGGAGACATGGCATCTTATCAAACTATTATTATGCTGCCTTTCTTGCATCTTATGCAATTTTATAAGACAACCCTTTTGAGACTGAACAGTTCAGGAAAGTTGTCGAGTTCTTCAAATACATCAGGTTCTCGGCTATGCAGCCTCTGCCACAGGGATTGTTATGTAGCTTACTTGCTGTGCAAGTACTGCTATTCTCGCCCAATTTGTCTTTTCCATGACATTGCACCACAGACTTGTTTATGTGGGCGAAATTATACCATTTTCAAAAGGAAGGACATTTTCTCACTGGAAGAAGCAGCAAAAAGTTTTCAACAGGAAAAAGAATGCGTTGACACAATCTCTCTGTCAAGTATATTCTCCTATAACAGAAATAAATGCAATAAAGATCATAAGGCATCTAATTCATTTCCACCTTTAAAATTAAACTGGAAGCAGAATAATCCTTGGCACAAAGAAAAAAGTATAAGAGGAACTGCTTATTCTCTAGGGGCAGCATCTAAACCGAAAACAAAAGTAGCTGACAGCATCAAGCACAATATTGAAAAGAAGACAACAATGAAGCATTGGAGAAACAATGGGCTTCCATCTGTGAAGGGTATCAAAAGGCCAGGAATCATTTATAACTTGAGAAAACGCAAATCAAATTTGAATGAGTTCCAGCACCAACTTCAACGGGCAACATCTAACAATTGA 1968 0.3979 MGAPEVSRCGRRRRRMAGKSSITQTATRHGSHKLSKFDLADLEWTNRIPECPIYHPSDHEFEHPLLYLQKIAPEASKYGICKIVSPIAASNPAAFVLMKEKKDFKFETNVQPLRLSKWNEKDTVTFSMRGRKYTYHEFEALANKAFFSRFHCCGDLPSSYVEKEFWHEMVHGEKGTVEYGVNVEGSAFSCDPDDRLGTSKWNLKVFFRLHADPIHLRVLLTSALLQLNFSRLLQSPLRLVEREIPGITDPMLYIGMLFSMFAWHVEDHYLYSINYHHSGANKTWYCVPGYAASQLEKTVLHHVYCNKILTKHGEDGAFKFLALKTTMFPPNVLLQHDVAVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFAIGNWFPLGAAASGRYAHLRMMPLIPYEELLCKEAMLVYKSSKVRRSKNKPGDMASYQTIIMLPFLHLMQFYKTTLLRLNSSGKLSSSSNTSGSRLCSLCHRDCYVAYLLCKYCYSRPICLFHDIAPQTCLCGRNYTIFKRKDIFSLEEAAKSFQQEKECVDTISLSSIFSYNRNKCNKDHKASNSFPPLKLNWKQNNPWHKEKSIRGTAYSLGAASKPKTKVADSIKHNIEKKTTMKHWRNNGLPSVKGIKRPGIIYNLRKRKSNLNEFQHQLQRATSNN 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9113g00004 655 Coils Coil 634 654 - -
Mupr9113g00004 655 SMART cupin_9 222 391 IPR003347 -
Mupr9113g00004 655 Pfam jmjN domain 52 84 IPR003349 -
Mupr9113g00004 655 SUPERFAMILY Clavaminate synthase-like 197 409 - -
Mupr9113g00004 655 Gene3D Cupin 51 434 - -
Mupr9113g00004 655 ProSiteProfiles JmjN domain profile. 51 92 IPR003349 -
Mupr9113g00004 655 SMART JmjN_1 50 91 IPR003349 -
Mupr9113g00004 655 Pfam JmjC domain, hydroxylase 251 374 IPR003347 -
Mupr9113g00004 655 PANTHER LYSINE-SPECIFIC DEMETHYLASE 43 606 - -
Mupr9113g00004 655 MobiDBLite consensus disorder prediction 1 28 - -
Mupr9113g00004 655 ProSiteProfiles JmjC domain profile. 221 391 IPR003347 -
Mupr9113g00004 655 FunFam Lysine-specific demethylase isoform A 46 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9113g00004 Mupr-Chr9113 17959 21763 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9113g00004 11 560 JUMONJI Transcription Factor Family AT2G34880 28.803 1.24e-56 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mupr9113g00004 JmjC 2e-38 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9113g00004 - - gmx:100809650 971.459