Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9112g00001 ATGACGACTTCCGAACCTCGCCTCTTGGGGTCTTTTTTTGCTCCAATGAGACTTTCTTCAGCTGCTTTTAGTCCTCCACACCAGGAAGGGGAAAGGCGAGTTCTAGATTCAGAACTTTGGCATGCATGTGCTGGTCCCCTTGTCTCTTTACCAGCGGTTGGAAGCCGCGTGGTATACTTTCCACAAGGTCACAGTGAACAGGTGGCTGTGTCTACCAACAAGGAAGTAGATGCTCATATCCCAAACTATCCAAGCTTGCCTCCTCAACTCATGTGTCAACTTCATAATATGACTATGCATGCTGATGTTGAGACTGATGAAGTGTACGCACAGATGACCTTGCAACCTCTGAATCCTCAAGAGCAAAAGGAGGCATACCTACCAGCAGAGTTGGGCACTCCAAGTAAACAGCCAACAAACTATTTCTGCAAAACTTTGACTGCCAGTGACACAAGCACTCATGGGGGATTCTCTGTACCTCGCCGGGCAGCTGAAAAAGTGTTTCCTCCATTGGATTTCTCTCAACAGCCTCCTGCTCAAGAATTAATTGCAAGGGATTTGCATGGTAATGAATGGAAATTCAGACATATCTTCCGGGGCCAGCCCAAAAGGCATCTACTTACAACTGGATGGAGTGTCTTTGTGAGTGCTAAAAGACTTGTTGCTGGTGATTCTGTGCTGTTTATCTGGCAATGCATTTTCTTCAATAGGAATGAAAAGAACCAACTGCTTCTTGGCATACGCCGTGCTAATCGACCACAAACTGTGATGCCTTCTTCAGTGTTGTCAAGTGATAGTATGCACTTGGGGCTTCTTGCTGCAGCAGCTCATGCAGCTGCAACAAATAGTCGTTTCACCATTTTCTATAACCCACGTGCTAGCCCATCAGAATTTGTCATACCCTTAGCAAAGTATGTTAAAGCTGTGTATCATACTCGAGTTTCAGTTGGTATGCGTTTCAGGATGCTGTTTGAAACAGAGGAGTCAAGTGTGCGGCGATATATGGGTACAATAACTGGAATTAGTGACCTGGATCCTGTCCGGTGGCAAAATTCACATTGGCGCTCAGTCAAGGTTGGCTGGGATGAATCCACTGCTGGAGAGAGGCAACCTAGAGTGTCACTATGGGAAATTGAACCATTAACTACATTTCCTATGTATCCATCCCCATTCCCTCTTAGACTTAAACGACCATGGCCTCCAGGATTGCCTTCATTCCATGGTATGAAGGATGACGATTTTGGCATGAATTCACCTCTGTTGTGGCTCCGAGACTCTGATAGAGGGCTTCAGACTCTTAATCTTCCAGGGATTGGGGTTAATCATTGGATGCAGCCCAGATTTGATCCCTCCATGTTGAATATGCAAACAGATATGTATCAAGCTGTGGCTGCTGCTGCTGTTCAGGACATGAGAAGTTTAGATCCTTCCAAACAGCATTCTGCTTCCTTACTTCAATTTCAGCAACCACAGAACTTCCCAAACAGGACTGCTGCTTTAATGCAGGCCCAGATGTTGCAGCAGTCACAACCTCAGCAGATTTTTGGAAACAATCAAGAGAACCAGCATTCACCACAATCTCAGCCACAAACTCAGGCTCATCTTCAGCAACATCTACAACGTCAACACTCATTCAACAGTCAGCATCATCATCATCACCACCAACAACAACAACTTCAACAACCGACACAGCAGCAACAGCAACAGCAAGTAGTAGAAAATCAGCAAATTTCCAGTGCAGTCTCTACTATGTCTCAGTTTGTTTCAGCAGCTCAACCTTCATCACCGCCTATGCAAGCTATCTCTTCTCTATGCCAACAGCAAAATTTTTCTGATTCAAATGGGAACCCTGTGGCTACTATTGTTTCTCCCCTGCACAGTATCTTGGGTTCATTTCCCCAGGATGAAGCATCTCATCTCCTGAACCTTCCTAGAACAAGCTCTTGGATTCCTGTTCAAAATTCAAGTGCGTGGCCCTCGAAGCGTGTTGCAGTGGATCCTCTCCTTTCTTCCGGAGCCTCTCAATGTGTTCTACCTCAGGTGGAGCAGCTAGGGCAGCCGCAGAGTACCATGTCTCAAAATGCTATTACTTTACCACCTTTTCCTGGTAGGGAGTGCTCAATAGATCAAGAAGGGAGCAATGATCCACAGCACCATCTCTTATTTGGTGTTAATATAGAGCCCTCGTCTCTTCTCATGCCTAATGCGATGTCAAGCCTTAAGGGGGTCAGCGGCAACAATGATTCCTCAACCTTGCCATATCAATCTTCTAATTATCTGAATACCACCACAGGCAACGATTCTTCATTGAATCACGGAATGACACAGACCATAGGCGAATCGGGTTTCCTGCAGAGTCCAGAAAATGCAGGACAAGGAAACCCACTGAACAAGACCTTTGTGAAGGTATATAAGTCAGGGTCCTTTGGAAGGTCATTGGATATAACTAAATTCAGCAGCTACCATGAGCTGCGAGGTGAACTTGCTCGAATGTTTGGCCTTGAAGGCGAGTTAGAGGACCCTATGAGATCAGGCTGGCAGCTTGTATTTGTAGACCGAGAGAACGATGTTCTTCTCCTCGGCGATGGCCCATGGCCGGAATTCGTAAATAGTGTATGGTGCATAAAGATACTTTCGCCTCAAGAAGTGCAGCAAATGGGCAACAGTGGCCTTGAGCTGTTGAACTCGGTTCCAATTCAAAGGCTCTCTAATGGCATCTGTGATGACTACGTGAGCCGTCAAGACCCAAGAAATTTATGCACTGGGATAACAACTGTGGGGTCTTTAGACTACTGA 2796 0.4596 MTTSEPRLLGSFFAPMRLSSAAFSPPHQEGERRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLMCQLHNMTMHADVETDEVYAQMTLQPLNPQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWQCIFFNRNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGMKDDDFGMNSPLLWLRDSDRGLQTLNLPGIGVNHWMQPRFDPSMLNMQTDMYQAVAAAAVQDMRSLDPSKQHSASLLQFQQPQNFPNRTAALMQAQMLQQSQPQQIFGNNQENQHSPQSQPQTQAHLQQHLQRQHSFNSQHHHHHHQQQQLQQPTQQQQQQQVVENQQISSAVSTMSQFVSAAQPSSPPMQAISSLCQQQNFSDSNGNPVATIVSPLHSILGSFPQDEASHLLNLPRTSSWIPVQNSSAWPSKRVAVDPLLSSGASQCVLPQVEQLGQPQSTMSQNAITLPPFPGRECSIDQEGSNDPQHHLLFGVNIEPSSLLMPNAMSSLKGVSGNNDSSTLPYQSSNYLNTTTGNDSSLNHGMTQTIGESGFLQSPENAGQGNPLNKTFVKVYKSGSFGRSLDITKFSSYHELRGELARMFGLEGELEDPMRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGNSGLELLNSVPIQRLSNGICDDYVSRQDPRNLCTGITTVGSLDY 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9112g00001 931 FunFam Auxin response factor 140 251 - -
Mupr9112g00001 931 Pfam Auxin response factor 275 358 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mupr9112g00001 931 Gene3D - 140 250 IPR015300 -
Mupr9112g00001 931 CDD B3_DNA 141 230 IPR003340 GO:0003677
Mupr9112g00001 931 MobiDBLite consensus disorder prediction 516 543 - -
Mupr9112g00001 931 ProSiteProfiles PB1 domain profile. 798 882 IPR000270 GO:0005515
Mupr9112g00001 931 FunFam Auxin response factor 313 385 - -
Mupr9112g00001 931 FunFam Auxin response factor 794 887 - -
Mupr9112g00001 931 SUPERFAMILY DNA-binding pseudobarrel domain 127 278 IPR015300 -
Mupr9112g00001 931 ProSiteProfiles B3 DNA-binding domain profile. 142 251 IPR003340 GO:0003677
Mupr9112g00001 931 Gene3D - 795 887 - -
Mupr9112g00001 931 SUPERFAMILY CAD & PB1 domains 797 873 - -
Mupr9112g00001 931 SMART B3_2 142 251 IPR003340 GO:0003677
Mupr9112g00001 931 MobiDBLite consensus disorder prediction 516 576 - -
Mupr9112g00001 931 MobiDBLite consensus disorder prediction 557 576 - -
Mupr9112g00001 931 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 32 887 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr9112g00001 931 Pfam B3 DNA binding domain 142 250 IPR003340 GO:0003677
Mupr9112g00001 931 Gene3D - 313 385 - -
Mupr9112g00001 931 Pfam AUX/IAA family 789 883 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9112g00001 Mupr-Chr9112 3967 10335 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9112g00001 16 505 B3 DNA Binding Superfamily AT1G30330 84.848 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr9112g00001 AUX_IAA 8e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9112g00001 - - gmx:100798719 1620.91