Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9094g00001 ATGGATAGGCTGAACAATCGGACCGACAACGGCCAAGAGCCGCCGCCCCAGCCGCTGGTTCCCATGCAGGTGGATGGGTTTCATTATGCCAATGGTTCCGACGAAGGCGAAGAAACTCTTCCACTCGCCAATGCCTCTTCTGCTTTGCACGCTAGAACAAGTGAACTCACCATTTCCTTCGAAGGCGAGGTCTATGTTTTTCCAGCTGTTACGCCAGAAAAGGTGCAGGCTGTATTATTACTCTTGGGAGGACAGGAGATGCCAAGTAGCGTCCCTGCCTCTGACTTATTGTTGCAGCAAAACTGTCAAGACATTAGGGAAATAAATGATCCGTCCCGAAGTTCAAAGAATTCACGAAGAATTGCATCACTTGTCAGGTTTCGTGAAAAACGAAAAGAGAGATGTTTTGAGAAGAAAATCCGGTATTCTTGCCGGAAAGAGGTTGCCCAGAGGATGCATCGTAAGAATGGACAGTTTGCATCATTGAAGGAAGACTACAAATCTCCTGCTGAAAACTGGGATTCAAGCAATGGTACTCCTTGCCCAGAATCTACATGCCAGCATTGTGGAATTAGTGAGAAGTCTACTCCAGCTATGCGTCGAGGACCAGCAGGTCCAAGATCTCTGTGCAATGCCTGTGGGCTTATGTGGGCAAATAAGGGAACTCTGAGAGATCTCAGCAAAGCAGGAAGGACTGCTTTTGAACAAAATGAACTGCCTTCAACAACAGAAGCAGAGCATGCTTGTGCTAACCAGGACAAGGAGGGAAGCCCTGAGGAAACTAAGCCTGTGCAAATGGATTCCAAACAGTCACCTGAGAAGACAAATGAGCAGTTTATTATCGGAACTGCTGAATCAGTTACCGACAACTTGTCCATCCAAGTGGAGAATCATGCTCTTAGTCTGCATGAGCAGGATACACTTGAGGATCTTGCTGATGCTTCTGGGACTGAATTTGAGATTCCTGCAGGTTTTGATGAGCAGGTTGATATTGATGATTCCAACCTGAGGACTTACTGGCTGTGA 1026 0.4698 MDRLNNRTDNGQEPPPQPLVPMQVDGFHYANGSDEGEETLPLANASSALHARTSELTISFEGEVYVFPAVTPEKVQAVLLLLGGQEMPSSVPASDLLLQQNCQDIREINDPSRSSKNSRRIASLVRFREKRKERCFEKKIRYSCRKEVAQRMHRKNGQFASLKEDYKSPAENWDSSNGTPCPESTCQHCGISEKSTPAMRRGPAGPRSLCNACGLMWANKGTLRDLSKAGRTAFEQNELPSTTEAEHACANQDKEGSPEETKPVQMDSKQSPEKTNEQFIIGTAESVTDNLSIQVENHALSLHEQDTLEDLADASGTEFEIPAGFDEQVDIDDSNLRTYWL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9094g00001 341 SMART tify_2 49 84 IPR010399 -
Mupr9094g00001 341 Pfam CCT motif 120 161 IPR010402 GO:0005515
Mupr9094g00001 341 ProSitePatterns GATA-type zinc finger domain. 186 213 IPR000679 GO:0006355|GO:0043565
Mupr9094g00001 341 Gene3D - 183 232 IPR013088 GO:0006355|GO:0008270
Mupr9094g00001 341 SMART GATA_3 180 233 IPR000679 GO:0006355|GO:0043565
Mupr9094g00001 341 MobiDBLite consensus disorder prediction 236 276 - -
Mupr9094g00001 341 MobiDBLite consensus disorder prediction 1 21 - -
Mupr9094g00001 341 ProSiteProfiles Tify domain profile. 49 84 IPR010399 -
Mupr9094g00001 341 MobiDBLite consensus disorder prediction 248 262 - -
Mupr9094g00001 341 ProSiteProfiles CCT domain profile. 120 162 IPR010402 GO:0005515
Mupr9094g00001 341 PANTHER GATA TRANSCRIPTION FACTOR 28 36 320 IPR045280 GO:0006355
Mupr9094g00001 341 CDD ZnF_GATA 185 228 IPR000679 GO:0006355|GO:0043565
Mupr9094g00001 341 Pfam tify domain 52 83 IPR010399 -
Mupr9094g00001 341 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 184 237 - -
Mupr9094g00001 341 Pfam GATA zinc finger 186 222 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9094g00001 Mupr-Chr9094 13638 19874 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9094g00001 55 229 Tify Gene Family AT1G51600 58.065 5.26e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr9094g00001 CCT 4e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9094g00001 - - gmx:102669848 600.897