Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9087g00001 ATGGCTAAGTGCAACTCATCCCTTCTCTCTTGGTTTCTGATCATTTTGCTTGTGCTGCTACAGACGCAAACGGGGAATGGGTCAAATACAGCATCCAAGTCGGAAAAAATCAAGTTGAGAGTAGGGGTGCCCCAAAAAAATGGTTTCCCCCAATTTGTGAATGTAGTTCCGGACTCTCACGACCCAAAAAAGTACATCGTAACTGGATATTGCATGGATGTATTCCATGCCGTCGTAAACCACTTACCTTTTGATGTTTCTCTAGATGTTCAACCTTATCTTATTGAATCAAAGGAGAATTCTGGAACATACGATACACTTCTCCAACAGATCCCAACAAAGTTTGATGTTGTGGTAGGGGATATAACAATCCTGGCCAACCGTTCGAATTTCGTAGATTTCACACTGCCATATACAGGATCGGGATTTAAAATGCTAGTAAAAGTTCAACATGGGAGGCAACAAACCATGTGGATTTTTGTGAAACCCTTCAGCTGGGATCTTTGGTTGAGCATAGTCATGATCTCTACGTTCATAGGGGTTACCATACTCATCATGGAAAGAAATGTAAATGCGCTGCCTAATCAGGATGGTTCGCCAAATCCAAGAAAGCTTAGCATTGCAACCATTTTATGGTTTCCAATTTCACAAGCCATTCTTCCTGAAAGACAAGTAGTGGCCATGAACTGCTCGAGATTTGTGTTGATGATTTGGCTTCTATTGGCGTTCGTCCTCATGCAAAGTTACACCGCAAACTTGACGTCTATATTGACCTTGGATCAGCTGCGACCCAGTTTTCTGAACGTGAATGATCTTAAAAAAGGGGGCTATTATGTTGGATATCAAACCGGGTCTTTCGTTTATGATGTGTTGGTTCATCAATTTAAGTTTGACCCACTCAAGCTGAAGTCATACAACACCAGTTCTGAGTATCGTGATGCTTTAAATAATGGAAACGGAGGTGGGGGTGTTGCAGCTATATTCGATGAGGTGCCTTACCTTAAAGTCTACCTTCAAGAATACGGATCTAATTACATCTTGGCTGGCCCCAGATATAGAAATGATGGCTTTGGTTTTGCATTCCCTTTAAACTCCAATCTGACCACTTACTTTTCGAGAGCCATCTTGAACGTGACTGAAAGTGAGTTAATGAATGATATTGAGGAAATATATTTTGGGAAGAATGATATTGGAGGAGAGGACCCGTCTACGGAAATGTCTTCCGCTCCTCTGAGTCTCACCTTTCACAGCTTTGAGGGGCTGTTCTTGATCACCGGGATTGCTACTTTATTAGCGCTGTTGGTCTCAGAAACTGTTATATGGCAAAGGCCCATTTTGATGGCTAAAGCATTCAGTCAGAGGTATTTGTTCCCCACTTCACCTTCCACAGAAACACCACGCGTTCATCCAACTCAGGATTCAACACACGGAATTGAGACCACACAAACGGGGAATGGGTCATATGCAACATCCAAGTCGGAAGTGATCAACTTGAGAGTAGGGGTACCCCAGAAAGATGGTTTCCGCCAGTTTGTGAATGTAGTTTGGGACTCTCACCATGAAAATAAGCACAACGTATCTGGATTTTGCATGGAAGTTTTCAATGCCGTTGTAAACCACTTACCTTTCAATGTTTCTCTAGATGTTCAACCTTATCCTATTGAATCAAACGACAATATTTCTAGAACATACGATCAACTTCTCCAACAGATCCCAGCAAGGAAGTATGATGTTGTGGTAGGGGATGTGACAATCCTGGCCAACCGTTCAAATTTCGTAGATTTCACACTGCCATATACAGCATCGGGAGTTCAAATGTTAGTACCAGTTCAACATGGGAGGCAACAAACCGTGTGGATTTTTGTGAAACCCTTCAGCTGGGATCTTTGGTTGAGCATAGTCATGATCTCTACGTTCATAGGGGTTGCTATACTCATCATGGAAAGAAATGTAAATGCGCTGCCTAATCAGGATGGTTCGCCAAATCCAAGAAAGCTTAGCGTTGCAACCATCTTATGCTTTCCAATTTCACAAGCCATTCTTCCTGAAAGACAAGTAGTGGCCATGAACTGCTCCAGATTTGTGTTGATGGTTTGGCTTCTATTGGCGTTCGTTCTCATGCAAAGTTACACCGCAAACTTGACGTCTATATTGACCTTGGATCAGCTGCGACCCAGTTTTCTGAACGTGAATGATCTTAAAAAAGGGGGCTATTATGTTGGATATCAAACCGGGTCTTTCGTTTTTGATGTGTTGGTTAAGGAATTTAAGTTTGACCCACACAAGTTGAGGTCATACAACAAAAGTCGTGATTATCATCATGCTTTAAGTATTGGAAGCCAAGGTGGGGGTGTTGCAGCTATATTCGATGAGCTACCTTACCTTAAAGTTTACCTTCAAGAATACAAATCCAATTACATCTTGGCCGGCCACAGATATAGAAATGCTGGCTTTGGTTTTTCTATCATGTCTGGTGACTGCATGTGTTTTTCCAAGGCATTCCCTTTAAACTCGAATCTGACCGCTCACTTTTCGAGAGCCATCTTGAAAGTGACTGAAAGTGAGTTAATGAATGAAATTGAGGAAAAATATTTTGGGAAGCATGATATTGGAGGAGAAGAGGCGTCTGCGCAAATGTCTTCTTCCCCTGCTCCAAGTCTCACCTTTCATAGCTTTGCAGGACTGTTCTTGATCACCGGGATTGCTACTTTATTAGCACTATTCGTCTCAGAAACTGTTATATGGCAATTGCCCATTTCGATGGCTAAAGCATACAGCAAGAGGTATTTCTTCCCCACTGCCGGACCCCGGACCCAACCACTAAATATCCGGTGA 2835 0.4247 MAKCNSSLLSWFLIILLVLLQTQTGNGSNTASKSEKIKLRVGVPQKNGFPQFVNVVPDSHDPKKYIVTGYCMDVFHAVVNHLPFDVSLDVQPYLIESKENSGTYDTLLQQIPTKFDVVVGDITILANRSNFVDFTLPYTGSGFKMLVKVQHGRQQTMWIFVKPFSWDLWLSIVMISTFIGVTILIMERNVNALPNQDGSPNPRKLSIATILWFPISQAILPERQVVAMNCSRFVLMIWLLLAFVLMQSYTANLTSILTLDQLRPSFLNVNDLKKGGYYVGYQTGSFVYDVLVHQFKFDPLKLKSYNTSSEYRDALNNGNGGGGVAAIFDEVPYLKVYLQEYGSNYILAGPRYRNDGFGFAFPLNSNLTTYFSRAILNVTESELMNDIEEIYFGKNDIGGEDPSTEMSSAPLSLTFHSFEGLFLITGIATLLALLVSETVIWQRPILMAKAFSQRYLFPTSPSTETPRVHPTQDSTHGIETTQTGNGSYATSKSEVINLRVGVPQKDGFRQFVNVVWDSHHENKHNVSGFCMEVFNAVVNHLPFNVSLDVQPYPIESNDNISRTYDQLLQQIPARKYDVVVGDVTILANRSNFVDFTLPYTASGVQMLVPVQHGRQQTVWIFVKPFSWDLWLSIVMISTFIGVAILIMERNVNALPNQDGSPNPRKLSVATILCFPISQAILPERQVVAMNCSRFVLMVWLLLAFVLMQSYTANLTSILTLDQLRPSFLNVNDLKKGGYYVGYQTGSFVFDVLVKEFKFDPHKLRSYNKSRDYHHALSIGSQGGGVAAIFDELPYLKVYLQEYKSNYILAGHRYRNAGFGFSIMSGDCMCFSKAFPLNSNLTAHFSRAILKVTESELMNEIEEKYFGKHDIGGEEASAQMSSSPAPSLTFHSFAGLFLITGIATLLALFVSETVIWQLPISMAKAYSKRYFFPTAGPRTQPLNIR 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9087g00001 944 SMART GluR_14 497 867 IPR001320 GO:0015276|GO:0016020
Mupr9087g00001 944 SMART GluR_14 38 394 IPR001320 GO:0015276|GO:0016020
Mupr9087g00001 944 Pfam Bacterial extracellular solute-binding proteins, family 3 68 394 IPR001638 -
Mupr9087g00001 944 Pfam Ligand-gated ion channel 868 902 IPR001320 GO:0015276|GO:0016020
Mupr9087g00001 944 FunFam Glutamate receptor 2.7 493 617 - -
Mupr9087g00001 944 FunFam Glutamate receptor 2.7 34 156 - -
Mupr9087g00001 944 MobiDBLite consensus disorder prediction 461 488 - -
Mupr9087g00001 944 CDD GluR_Plant 38 392 - -
Mupr9087g00001 944 Pfam Bacterial extracellular solute-binding proteins, family 3 522 867 IPR001638 -
Mupr9087g00001 944 Gene3D - 618 764 - -
Mupr9087g00001 944 Gene3D - 157 297 - -
Mupr9087g00001 944 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 34 443 IPR015683 -
Mupr9087g00001 944 SUPERFAMILY Periplasmic binding protein-like II 521 867 - -
Mupr9087g00001 944 Gene3D - 491 617 - -
Mupr9087g00001 944 Gene3D - 31 156 - -
Mupr9087g00001 944 CDD GluR_Plant 498 865 - -
Mupr9087g00001 944 Pfam Ligand-gated ion channel 395 428 IPR001320 GO:0015276|GO:0016020
Mupr9087g00001 944 SUPERFAMILY Periplasmic binding protein-like II 10 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9087g00001 Mupr-Chr9087 2300 12495 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9087g00001 497 909 Ion Channels AT5G11210 35.663 1.64e-77 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9087g00001 K05387 - gmx:100807817 721.079