Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9083g00001 ATGGGTTGTCGGTATCTAAGCCCACGCGTCATCAGGACACACGATAGCACTGAGGTTTTTGTGCCACCAACGATACTTGAGATAGATCTCTTGAGGATGGTGAGGGGGAAAACTCAGATGAAGCGCATCGAAAATGAGACGAGTAGGCAAGTAACCTTCTCCAAGAGAAGAAACGGCTTGCTTAAGAAGGCCTTTGAGCTTTCAGTGCTCTGTGATGCTGAAGTCGCACTCATCGTCTTCTCCACCAGAGGGAGGCTTTATGAGTTCTCCAGTTCAAGTATTCCAACCATCCTTTTCTGCCAACATTGTTCATACTTACATTAA 324 0.463 MGCRYLSPRVIRTHDSTEVFVPPTILEIDLLRMVRGKTQMKRIENETSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSTRGRLYEFSSSSIPTILFCQHCSYLH 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9083g00001 107 FunFam Agamous-like MADS-box protein AGL13 45 104 - -
Mupr9083g00001 107 ProSitePatterns MADS-box domain signature. 35 89 IPR002100 GO:0003677|GO:0046983
Mupr9083g00001 107 ProSiteProfiles MADS-box domain profile. 33 93 IPR002100 GO:0003677|GO:0046983
Mupr9083g00001 107 CDD MADS_MEF2_like 35 98 IPR033896 GO:0000977|GO:0045944
Mupr9083g00001 107 PANTHER SERUM RESPONSE FACTOR HOMOLOG 35 93 - -
Mupr9083g00001 107 SUPERFAMILY SRF-like 35 98 IPR036879 GO:0003677|GO:0046983
Mupr9083g00001 107 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 42 89 IPR002100 GO:0003677|GO:0046983
Mupr9083g00001 107 PRINTS MADS domain signature 70 91 IPR002100 GO:0003677|GO:0046983
Mupr9083g00001 107 PRINTS MADS domain signature 35 55 IPR002100 GO:0003677|GO:0046983
Mupr9083g00001 107 PRINTS MADS domain signature 55 70 IPR002100 GO:0003677|GO:0046983
Mupr9083g00001 107 Gene3D - 45 105 IPR036879 GO:0003677|GO:0046983
Mupr9083g00001 107 SMART madsneu2 33 92 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9083g00001 Mupr-Chr9083 13941 15014 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9083g00001 33 95 MADS-box Gene Family AT4G11880 90.625 2.02e-34 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mupr9083g00001 SRF-TF 6.3e-27 No_clan