Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9073g00004 ATGAAACCATTGAATACCCAAAGGATCCATCTTATTTGCATAGAGTGGTACATGCAATTAATTATGTCATTCCATTTCTTAAACTTTGTGGTGCTCATCATCACCCTCTTGTCACAAAACTCCAATGGTTCCCTGAACCCAAAGTTTCAAGCTTGTGAACCCAAATCATGCGGCAATAACCAAACTATAAGCTATCCTTTCCACATTGAAGGGACACAAGAACCCTTTTGTGGGTACCCTGGTTTTGGCCTCTCTTGTGGCAATGATGGCTTCCCATTCCTTAACATGTCTAATGACAAATACATCATCCACCAAATATTCTACAACAACAACTCATTGCGCGTGTCCAATGCTGTGTTTTCGAGACCAAACACTAGGAGTTGTCTTCCTCGTACCCAGAACCTCACTCTTGCGGGTACGAGGTTGGCTCTTGCTCCCAACCAAAAGGACCTATTCTTGTTGTTCGGATGTGACCCGAATGAAGGGTTGCAAGAGCACAGAATTGGGTGTTTTGTAGAAAACAAAACAAGTTCAGTTGTGGCCATGAGTAGGGAAGACCAAAACTGGGGCTTTGCTTTGAAGAATTGCAAGGGTGGTATGGTGAATGTGACAGTCAAAGATGAAGAAGGAGGGGTTCGAGAAGGGTTGGGAAGAGGGTTCGTGTTGAATTGGAATGTCAGTGATTGCAACAAGTGCAAAAACAGTGGAGGGAAGTGTGGGTTTGACACCCACATATTCAGTTTCAGATGTTACTGCCCTCATGATACTCATGCTCGGAAATGTTCTAAAGAAAAATCTGGAAATTTGGCTGTTATACTGGCGACAGTTTTTGCTGTTGCTGGATTTGGAGTTATAATTATTGCAGTATACTGTTTTAGAAGGAATCTATGGCTCATATTGTGGAAGGGGAAATCTAGAGCTAATCAAGATTTTGAGGCCTTTCTTAGGAATCATGGACCACTTGCTGTAAGAAGATATAGCTCCTTCGAAATAAAGAAAATGACCAAGTCTTATAAAGAAAAACTGGGCCAAGGAGGCTATGGAAGTGTGTTCAAAGGGAAGTTAGAAGATGGATCTCTAGTTGCTGTTAAGGTCTTGAATGAATTAAAAGGAAATGGAGAAGAATTTATGAATGAGGTAGCAAGCATTAGCAGGACTTCTCACGTGAACATTGTCACTCTTATTGGATTTTGCTTTGAAGAATCCAAGAAGGCTCTAGTCTATGAGTTCATGGCTAATGGGTCACTAGAGAAGTTTATATTTGAGACTAATGACTTGATAGGTGATTGCCAATTGAACTATGAAATGTTATACCAAATTGCTGTTGGTGTTGGTCGAGGACTAGAGTACTTGCATAGAGGATGCAACACTCGAATATTTCATTTTGACATAAAGCCTCACAACATATTGTTGGATGAGAATTTTTGTCCAAAGATATCTGATTTTGGACTTGCTAAAATATGCCCTGGAAATGAGAGTGTTGTGTCTATGTTGACTGCTAGAGGAACTATAGGATATATTGCTCCTGAGGTATTTTGTAGAAATATTGGAGTTGTATCTCACAAGTCAGATGTTTACAGTTATGGAATGATGGTGTTAGAAATGGTGGGAGGAAGAAAGAATATTAATATTGAAGTTGATTCTACAAGTGAGATATATTTTCCTTATTGGATTTACAAGCGTTTGGAACTAAATCAAGAGCTTGCATTGAGGAATGTTATGAATGAGAGTGACAAAGAGAAGATAAAAAAGATGGTGCTAGTAAGTTTGTGGTGTATTCAAACTGATCCTTCAAATCGTCCAATAATGCATAGGGTGGTGGAGATGCTCGAAGGGAATGTTGAAACCATACAAGTACCACCAAAACCTTTCTTATCATCCCCTTCAAGATTGCCACACACTTCTTCTTATTGA 1914 0.396 MKPLNTQRIHLICIEWYMQLIMSFHFLNFVVLIITLLSQNSNGSLNPKFQACEPKSCGNNQTISYPFHIEGTQEPFCGYPGFGLSCGNDGFPFLNMSNDKYIIHQIFYNNNSLRVSNAVFSRPNTRSCLPRTQNLTLAGTRLALAPNQKDLFLLFGCDPNEGLQEHRIGCFVENKTSSVVAMSREDQNWGFALKNCKGGMVNVTVKDEEGGVREGLGRGFVLNWNVSDCNKCKNSGGKCGFDTHIFSFRCYCPHDTHARKCSKEKSGNLAVILATVFAVAGFGVIIIAVYCFRRNLWLILWKGKSRANQDFEAFLRNHGPLAVRRYSSFEIKKMTKSYKEKLGQGGYGSVFKGKLEDGSLVAVKVLNELKGNGEEFMNEVASISRTSHVNIVTLIGFCFEESKKALVYEFMANGSLEKFIFETNDLIGDCQLNYEMLYQIAVGVGRGLEYLHRGCNTRIFHFDIKPHNILLDENFCPKISDFGLAKICPGNESVVSMLTARGTIGYIAPEVFCRNIGVVSHKSDVYSYGMMVLEMVGGRKNINIEVDSTSEIYFPYWIYKRLELNQELALRNVMNESDKEKIKKMVLVSLWCIQTDPSNRPIMHRVVEMLEGNVETIQVPPKPFLSSPSRLPHTSSY 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9073g00004 637 SMART serkin_6 336 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr9073g00004 637 SUPERFAMILY Protein kinase-like (PK-like) 319 611 IPR011009 -
Mupr9073g00004 637 Gene3D Phosphorylase Kinase; domain 1 314 410 - -
Mupr9073g00004 637 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Mupr9073g00004 637 ProSiteProfiles Protein kinase domain profile. 336 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr9073g00004 637 Pfam Wall-associated receptor kinase galacturonan-binding 52 116 IPR025287 GO:0030247
Mupr9073g00004 637 PANTHER RUST RESISTANCE KINASE LR10-RELATED 308 627 IPR045874 GO:0004672
Mupr9073g00004 637 Gene3D Transferase(Phosphotransferase) domain 1 411 619 - -
Mupr9073g00004 637 Pfam Wall-associated receptor kinase C-terminal 175 253 IPR032872 -
Mupr9073g00004 637 FunFam PR5-like receptor kinase 411 622 - -
Mupr9073g00004 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Mupr9073g00004 637 Pfam Protein kinase domain 339 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr9073g00004 637 FunFam serine/threonine-protein kinase PBS1-like 304 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9073g00004 Mupr-Chr9073 32475 37163 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9073g00004 23 625 Receptor kinase-like Gene Family AT1G66910 40.406 1.29e-138 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mupr9073g00004 Pkinase 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9073g00004 - - lang:109359375 1008.44