Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mupr9069g00002 | ATGTCGAAGAGGAAGTTCGGATTCGAAGGTTTCGGCATAAACCGCCAATCCACCTACAGCTTCGAGCGATCTCAGGCCCCTCAGCGACTCTACGTCCCTCCCTCGGCGCGCCACGGCCACGACAACTATGAGGACACCGACCTCGACAACATCGAGTACGACGACAACGACGAGGCCAACAAGAACAATGGCCGCAACGACGACGACGAAATCGACCCCCTCGACGCGTTCATGGAGGGGATTCACGAGGAGATGAGGGCGGCGCCGCCTCCGAAGCCGGCGGAGAAGGCCGATGACAGGTACAGGGACGACGACGACGACGATCCGATGGAGAGCTTTTTGAGGGCGAAGAAGGATTTAGGGCTGACCCTCGCGTCGGAGGCGCTGCACGCTGGGTACGATTCCGATGAGGAGGTATATGCTGCTGCGAAAGCTGTGGACGCGGGTATGGTTGAGTATGATTCTGATGATAACCCTATTGTTCTTGACAAGAAGAAAATTGAGCCCATTCCTCCTCTCGATCACTCTTCCATCGATTACGAGCCCTTCAATAAGGATTTTTATGAGGAAACACCTTCAATATCAGGTATGAGTGAGCAGGATGTAAGTGAATACCGGAAGGGTTTGGCTATTCGCGTATCAGGTTTTGATGTTCCTAAGCCAATAAAGACATTTGAGGACTGCGGGTTTCCTTCACAGATTATGAGTGCTATAAAAAAACAAGGGTATGAGAAGCCCACGTCTATACAATGTCAGGCTTTGCCAGTTGTGCTTTCTGGCAGGGATATCATTGGTATAGCAAAAACCGGTTCTGGTAAAACTGCTGCTTTTGTGCTTCCTATGATTGTGCACATCATGGATCAGCCTGAGCTTCAGAAGGAGGAGGGTCCTATAGGGGTGATCTGTGCACCTACCAGAGAGTTGGCACATCAGATATATCTGGAGTCCAAGAAATTTGCAAAGGCATATGGGGTACGTGTCTCTGCTGTCTATGGTGGAATGTCAAAACTTGAACAGTTCAAAGAACTCAAGGCGGGATGCGAGATTGTTGTTGCTACCCCTGGCAGATTGATAGACATGCTGAAAATGAAGGCATTGACAATGATGAGGGCAACTTACCTGGTGCTTGACGAGGCTGATAGGATGTTTGATCTTGGGTTTGAGCCACAAGTAAGGTCCATTGTTGGTCAGATTAGGCCGGACCGCCAAACTTTACTCTTTTCTGCAACAATGCCTCGTAAAGTTGAAAAGTTGGCCAGGGAAATCCTTACTGATCCTATTAGAGTAACTGTTGGAGAGGTTGGGATGGCAAATGAAGATATTACTCAAGTTGTTCATGTAATTCCTTCTGATTCTGAGAAATTGCCTTGGCTTCTGGAAAAGCTGCCCGAAATGATTGATCAAGGTGATACCCTAGTTTTTGCTTCCAAAAAGGCTACTGTGGATGAAATTGAATCACAATTGGCTCAGAGAGGCTTTAAAGTTGCTGCCCTGCATGGTGATAAAGATCAAGCTTCACGTATGGATATTTTACAGAAGTTTAAATCTGGTGTCTACCATGTGCTCATTGCAACTGATGTTGCTGCCCGTGGTCTTGACATCAAGTCAATAAAGTCAGTGGTAAACTTTGATATTGCAAAAGATATGGACATGCATGTCCATCGCATTGGAAGAACAGGCCGTGCTGGTGACAAGGATGGTGTTGCATACACTCTTATAACTCAGAAAGAAGCACGGTTTGCTGGTGAATTGGTTAATAGCTTAGTTGCTGCTGGTCAGAATGTGTCAGTGGAATTGATGGATCTTGCTATGAAGGATGGGAGATTCAGGTCAAAACGTGATGCAAGAAAAGGAGGTGGGAAAAAAGGCAGAGGCAGAGGTGGTGGCGGGGGTGGCCGAGGTGTACGAGGAGTGGATTTTGGCTTGGGCATTGGATATAATCCTGAGTCAAACAGTGCACCATCTAACACAGTTCCCACTCGATCTGCCGCTGTAAATTCTCTGCGAACAGGAATGATGTCACAATTTAAGAGTAACTTTGTTGCTGCTTCATCAAACTCTCAGAACCAAGGATTCGGTAACAATACAAGCATGGTTGCTAGTAAGAGACCAGCACTCCCTGGTTTCGTATCTGGTGGATCAATTGGTGGTGATATAAATACTTATCAGCAGCACACTGCTTCACCCAGTCCTGCTACATCAGTGGTAAATTCCACCAGTCAAAGTTCTGGAGTAAATCCTGGTCAGAAGAGCGCGAACAGTTCTAAACCTAAGGAAAGGCGGAGGCCATCAGGTTGGGATAGATAG | 2307 | 0.4725 | MSKRKFGFEGFGINRQSTYSFERSQAPQRLYVPPSARHGHDNYEDTDLDNIEYDDNDEANKNNGRNDDDEIDPLDAFMEGIHEEMRAAPPPKPAEKADDRYRDDDDDDPMESFLRAKKDLGLTLASEALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNPIVLDKKKIEPIPPLDHSSIDYEPFNKDFYEETPSISGMSEQDVSEYRKGLAIRVSGFDVPKPIKTFEDCGFPSQIMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLESKKFAKAYGVRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPRKVEKLAREILTDPIRVTVGEVGMANEDITQVVHVIPSDSEKLPWLLEKLPEMIDQGDTLVFASKKATVDEIESQLAQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITQKEARFAGELVNSLVAAGQNVSVELMDLAMKDGRFRSKRDARKGGGKKGRGRGGGGGGRGVRGVDFGLGIGYNPESNSAPSNTVPTRSAAVNSLRTGMMSQFKSNFVAASSNSQNQGFGNNTSMVASKRPALPGFVSGGSIGGDINTYQQHTASPSPATSVVNSTSQSSGVNPGQKSANSSKPKERRRPSGWDR | 768 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mupr9069g00002 | 768 | MobiDBLite | consensus disorder prediction | 720 | 753 | - | - | |
Mupr9069g00002 | 768 | SMART | helicmild6 | 482 | 563 | IPR001650 | - | |
Mupr9069g00002 | 768 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 454 | 603 | IPR001650 | - | |
Mupr9069g00002 | 768 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 187 | 603 | - | - | |
Mupr9069g00002 | 768 | MobiDBLite | consensus disorder prediction | 1 | 111 | - | - | |
Mupr9069g00002 | 768 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 370 | 598 | IPR027417 | - | |
Mupr9069g00002 | 768 | MobiDBLite | consensus disorder prediction | 610 | 635 | - | - | |
Mupr9069g00002 | 768 | CDD | SF2_C_DEAD | 441 | 573 | - | - | |
Mupr9069g00002 | 768 | Gene3D | - | 186 | 430 | IPR027417 | - | |
Mupr9069g00002 | 768 | MobiDBLite | consensus disorder prediction | 754 | 768 | - | - | |
Mupr9069g00002 | 768 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 223 | 251 | IPR014014 | GO:0003724 | |
Mupr9069g00002 | 768 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 254 | 429 | IPR014001 | - | |
Mupr9069g00002 | 768 | Pfam | DEAD/DEAH box helicase | 247 | 418 | IPR011545 | GO:0003676|GO:0005524 | |
Mupr9069g00002 | 768 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 375 | 383 | IPR000629 | - | |
Mupr9069g00002 | 768 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 206 | 432 | IPR027417 | - | |
Mupr9069g00002 | 768 | FunFam | probable ATP-dependent RNA helicase DDX17 | 185 | 432 | - | - | |
Mupr9069g00002 | 768 | Pfam | Helicase conserved C-terminal domain | 458 | 563 | IPR001650 | - | |
Mupr9069g00002 | 768 | MobiDBLite | consensus disorder prediction | 55 | 100 | - | - | |
Mupr9069g00002 | 768 | SMART | ultradead3 | 242 | 444 | IPR014001 | - | |
Mupr9069g00002 | 768 | Gene3D | - | 431 | 607 | IPR027417 | - | |
Mupr9069g00002 | 768 | MobiDBLite | consensus disorder prediction | 720 | 768 | - | - | |
Mupr9069g00002 | 768 | CDD | DEADc_DDX42 | 234 | 430 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mupr9069g00002 | Mupr-Chr9069 | 28008 | 31786 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mupr9069g00002 | 223 | 579 | Eukaryotic Initiation Factors Gene Family | AT3G13920 | 35.278 | 3.53e-62 | 213 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mupr9069g00002 | K12835 | - | gmx:100814854 | 1358.58 |