Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9069g00002 ATGTCGAAGAGGAAGTTCGGATTCGAAGGTTTCGGCATAAACCGCCAATCCACCTACAGCTTCGAGCGATCTCAGGCCCCTCAGCGACTCTACGTCCCTCCCTCGGCGCGCCACGGCCACGACAACTATGAGGACACCGACCTCGACAACATCGAGTACGACGACAACGACGAGGCCAACAAGAACAATGGCCGCAACGACGACGACGAAATCGACCCCCTCGACGCGTTCATGGAGGGGATTCACGAGGAGATGAGGGCGGCGCCGCCTCCGAAGCCGGCGGAGAAGGCCGATGACAGGTACAGGGACGACGACGACGACGATCCGATGGAGAGCTTTTTGAGGGCGAAGAAGGATTTAGGGCTGACCCTCGCGTCGGAGGCGCTGCACGCTGGGTACGATTCCGATGAGGAGGTATATGCTGCTGCGAAAGCTGTGGACGCGGGTATGGTTGAGTATGATTCTGATGATAACCCTATTGTTCTTGACAAGAAGAAAATTGAGCCCATTCCTCCTCTCGATCACTCTTCCATCGATTACGAGCCCTTCAATAAGGATTTTTATGAGGAAACACCTTCAATATCAGGTATGAGTGAGCAGGATGTAAGTGAATACCGGAAGGGTTTGGCTATTCGCGTATCAGGTTTTGATGTTCCTAAGCCAATAAAGACATTTGAGGACTGCGGGTTTCCTTCACAGATTATGAGTGCTATAAAAAAACAAGGGTATGAGAAGCCCACGTCTATACAATGTCAGGCTTTGCCAGTTGTGCTTTCTGGCAGGGATATCATTGGTATAGCAAAAACCGGTTCTGGTAAAACTGCTGCTTTTGTGCTTCCTATGATTGTGCACATCATGGATCAGCCTGAGCTTCAGAAGGAGGAGGGTCCTATAGGGGTGATCTGTGCACCTACCAGAGAGTTGGCACATCAGATATATCTGGAGTCCAAGAAATTTGCAAAGGCATATGGGGTACGTGTCTCTGCTGTCTATGGTGGAATGTCAAAACTTGAACAGTTCAAAGAACTCAAGGCGGGATGCGAGATTGTTGTTGCTACCCCTGGCAGATTGATAGACATGCTGAAAATGAAGGCATTGACAATGATGAGGGCAACTTACCTGGTGCTTGACGAGGCTGATAGGATGTTTGATCTTGGGTTTGAGCCACAAGTAAGGTCCATTGTTGGTCAGATTAGGCCGGACCGCCAAACTTTACTCTTTTCTGCAACAATGCCTCGTAAAGTTGAAAAGTTGGCCAGGGAAATCCTTACTGATCCTATTAGAGTAACTGTTGGAGAGGTTGGGATGGCAAATGAAGATATTACTCAAGTTGTTCATGTAATTCCTTCTGATTCTGAGAAATTGCCTTGGCTTCTGGAAAAGCTGCCCGAAATGATTGATCAAGGTGATACCCTAGTTTTTGCTTCCAAAAAGGCTACTGTGGATGAAATTGAATCACAATTGGCTCAGAGAGGCTTTAAAGTTGCTGCCCTGCATGGTGATAAAGATCAAGCTTCACGTATGGATATTTTACAGAAGTTTAAATCTGGTGTCTACCATGTGCTCATTGCAACTGATGTTGCTGCCCGTGGTCTTGACATCAAGTCAATAAAGTCAGTGGTAAACTTTGATATTGCAAAAGATATGGACATGCATGTCCATCGCATTGGAAGAACAGGCCGTGCTGGTGACAAGGATGGTGTTGCATACACTCTTATAACTCAGAAAGAAGCACGGTTTGCTGGTGAATTGGTTAATAGCTTAGTTGCTGCTGGTCAGAATGTGTCAGTGGAATTGATGGATCTTGCTATGAAGGATGGGAGATTCAGGTCAAAACGTGATGCAAGAAAAGGAGGTGGGAAAAAAGGCAGAGGCAGAGGTGGTGGCGGGGGTGGCCGAGGTGTACGAGGAGTGGATTTTGGCTTGGGCATTGGATATAATCCTGAGTCAAACAGTGCACCATCTAACACAGTTCCCACTCGATCTGCCGCTGTAAATTCTCTGCGAACAGGAATGATGTCACAATTTAAGAGTAACTTTGTTGCTGCTTCATCAAACTCTCAGAACCAAGGATTCGGTAACAATACAAGCATGGTTGCTAGTAAGAGACCAGCACTCCCTGGTTTCGTATCTGGTGGATCAATTGGTGGTGATATAAATACTTATCAGCAGCACACTGCTTCACCCAGTCCTGCTACATCAGTGGTAAATTCCACCAGTCAAAGTTCTGGAGTAAATCCTGGTCAGAAGAGCGCGAACAGTTCTAAACCTAAGGAAAGGCGGAGGCCATCAGGTTGGGATAGATAG 2307 0.4725 MSKRKFGFEGFGINRQSTYSFERSQAPQRLYVPPSARHGHDNYEDTDLDNIEYDDNDEANKNNGRNDDDEIDPLDAFMEGIHEEMRAAPPPKPAEKADDRYRDDDDDDPMESFLRAKKDLGLTLASEALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNPIVLDKKKIEPIPPLDHSSIDYEPFNKDFYEETPSISGMSEQDVSEYRKGLAIRVSGFDVPKPIKTFEDCGFPSQIMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLESKKFAKAYGVRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPRKVEKLAREILTDPIRVTVGEVGMANEDITQVVHVIPSDSEKLPWLLEKLPEMIDQGDTLVFASKKATVDEIESQLAQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITQKEARFAGELVNSLVAAGQNVSVELMDLAMKDGRFRSKRDARKGGGKKGRGRGGGGGGRGVRGVDFGLGIGYNPESNSAPSNTVPTRSAAVNSLRTGMMSQFKSNFVAASSNSQNQGFGNNTSMVASKRPALPGFVSGGSIGGDINTYQQHTASPSPATSVVNSTSQSSGVNPGQKSANSSKPKERRRPSGWDR 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9069g00002 768 MobiDBLite consensus disorder prediction 720 753 - -
Mupr9069g00002 768 SMART helicmild6 482 563 IPR001650 -
Mupr9069g00002 768 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 454 603 IPR001650 -
Mupr9069g00002 768 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 187 603 - -
Mupr9069g00002 768 MobiDBLite consensus disorder prediction 1 111 - -
Mupr9069g00002 768 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 598 IPR027417 -
Mupr9069g00002 768 MobiDBLite consensus disorder prediction 610 635 - -
Mupr9069g00002 768 CDD SF2_C_DEAD 441 573 - -
Mupr9069g00002 768 Gene3D - 186 430 IPR027417 -
Mupr9069g00002 768 MobiDBLite consensus disorder prediction 754 768 - -
Mupr9069g00002 768 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 223 251 IPR014014 GO:0003724
Mupr9069g00002 768 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 254 429 IPR014001 -
Mupr9069g00002 768 Pfam DEAD/DEAH box helicase 247 418 IPR011545 GO:0003676|GO:0005524
Mupr9069g00002 768 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 375 383 IPR000629 -
Mupr9069g00002 768 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 206 432 IPR027417 -
Mupr9069g00002 768 FunFam probable ATP-dependent RNA helicase DDX17 185 432 - -
Mupr9069g00002 768 Pfam Helicase conserved C-terminal domain 458 563 IPR001650 -
Mupr9069g00002 768 MobiDBLite consensus disorder prediction 55 100 - -
Mupr9069g00002 768 SMART ultradead3 242 444 IPR014001 -
Mupr9069g00002 768 Gene3D - 431 607 IPR027417 -
Mupr9069g00002 768 MobiDBLite consensus disorder prediction 720 768 - -
Mupr9069g00002 768 CDD DEADc_DDX42 234 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9069g00002 Mupr-Chr9069 28008 31786 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9069g00002 223 579 Eukaryotic Initiation Factors Gene Family AT3G13920 35.278 3.53e-62 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9069g00002 K12835 - gmx:100814854 1358.58