Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9062g00001 ATGGAATTTTTTTTAGCAAAAATACTGAAAAACCAACTAACACCCATTTTCCTCTCTCTTTCTCTGTCAGAAGACCAAAAAAAAAACCACCTCTGTTGTTGCGGTGTCCGTTTTCCTCTCCAAACCAGAGAGCTACCGCCGGCGAGCCCGTCCTCGCCGGTAATTCGCTCTTCGTCGCCGGCGCTGCCGGAACCTCCATTTTTTCGATTTGAGCTTCCAATTGCGTTTGCTTTTCTCACAGGCTCCTTTCAGAGGAGTCGTTTTCGTGCAATAATTTGTCGTTTTCCCTTCTTTTTTCGCGGCGGAGAGCGTCCGGGATCGCAATGCAGAGGGAGGGAGGTTCTTGTTGCGTCGAAAAGCACGGGATCTCTAGTTTCTGAAATTCCTATGCCTTGGAGCTTTCTGGATGAGGAGTGTGGTGAATTTTGTGGAGGAGAGCTTTTTGGAGATTTTGTTCTAGCGAGGATGCCTTCTGAAATAACGGAGAATAGGGGTGTTTCTGCCTCATCCCACTTTTTGGATGACATTTCCTATGCTTCGGAGAGTATTGGATTAAGGAAGCCAAAATCTATTCATGACCATTTTCTACAAGGGAAGAGTGAAATGACGGCATCACCTGGCAGCATTTTGAATACTCCATCACCCCTTGAAACAAATGCAAAAACAGGCTTGCCAATGTCTCAGACTACTCAATTGGGTGAAATCACAGAAGACCTACATTTTGGTGGAGAAGCAGGCACTATGGATATGCTGAAGGATTCCATGGAATCATTGAATTATCACAAGAGATCATGGTCTAATGTGCATAGGCAGCCAGCATCTAGCCCATATGGTTTAATTGGGAAGAAGATTGTCACCAATGCTGCTGCACGAGAAATGAGAGTATTGGGGAATGGCATGCTGTCTGATAAACCCATTACTGTTGGTTCCCTTCCTGAGGAAGAACCGTATAAATCTCTTGAAGAAATTGAGGCTGACACTATTGGAAATCTCCTTCCTGATGAAGATGACCTGTTTTCTGGAGTCACTGATGAGTTAGGATGCAGTACTCACACTAGAGTGAATGATGATTTTGAAGATTTTGATTTGTTCAGCAGTGGTGGAGGCATGGAGTTGGAAGGAGATGAACATCTAATTTCCGGAAAAAGAACCAGTTGTGTAGATGGAGATCCTGATTACTTTGGAGTTTCTAAAGGAAAAATTCCTTTTGGTGAACAATCTTCTAGAACACTTTTTGTTAGAAACATCAATAGCAATGTAGAAGACTCTGAGCTAAAGGCTCTCTTTGAGCAATATGGAGATATCCGAACCATATATACTGCCTGCAAGCATCGTGGGTTTGTTATGATTTCTTATCATGACCTAAGGGCAGCACAAAATGCAATGGAAGCACTTCAAAATAGGCCATTGAGATCTAGGAAACTTGATATACATTATTCAATTCCAAAGGGCAATGCTCCAGAGAAGGATATTGGCCATGGGACGCTGATGATATCTGATCTTGATTCATCTGTTTTGAATGATGAACTTAAACATATTTTTGGGTTTTATGGAGAAATTAGAGAGATCTATGAATATCCACAATTGAATCATGTCAAATTTATCGAATTTTATGATGTCCGAGCTGCGGAAGCTTCTCTTCGTGCATTGAATGGGATCTGCTTTGCTGGGAAGCATATCAAGCTTGAACCTGGCCTTCCCAAGATTGCAACATGCATGATGCAGCAGTCTCAGAAGGGACAAGATGAACCTGATCTTGGTCATAGTTTGAGTGACAATGGATCCTTACGACATAAGGCAGGAGTGTCATCTGGATTTTATGCATCTGGTGGCGGCTTGGAAAATGGATATAATCAGGGATTTCACTCGGCAAAACGGCTACCTGCTTTTATTGACAACTCATTGTTTCATGGGAATTCTAGCATTCACAAGACCGGAAGAGGGACATCTGCTGGAAAAGTATCTGGTGTTTTTGAGGCCAGTAATGCTGTTGATGCAATGAAATTTGCATCCATGCCAAGGTTCCATCCTCATTCTTTACCTGAATATCGTGATAGTTTATCTAATGGCAGTCCTTACAACTATTCGGGTACCATTAACACGGCTGCCAATATTGGTACTGGATCGACGGAATCATCTGACAGCAGGCACATTCAAGGAATAAGCTCAACTGGAAACCTAGCAGAGTTTAATGCAGGAGGAAATGGGAGTCACCCCCATCATGGACTTTATCATATGTGGAATGGCTCCAGCTTGCATCAGCAATCTCCATCAAATCCCATGCTTTGGCCACAGAAAACACCATCCTTTGTTAATGGTGCTTGTTCTCCACGTCTTCCACAACAGGTGCCCAGCTTTCCTAGAACACCATCTCATGTGCTGAGAGCATCACATATAGACCATCAAGTGGGATCAGCACCAGTTGTTACAGCCTCACCTTGGGAAAGACAACATTCTTACTTGGGAGAGTCACCTGACACTTCTGGTTTAAGATTGGGTTCTGTAGGAAGTCCAGGTTTTCATGGTGGCTGGCAGTTGCATTCTCCGGCTTCTCACAGCATATTTTCTCATGTTGGTGGGAATGGTACAGAATTGACGTCAAATGCTGGACAGGGTTCTCCTAAGCAATTGTCACATGTTTTCCCTGGGAGACTTCCCATGACTTTGGTTTCTAAATTTGACTCTACCAATGAACGAATGAGAAACATCTATCCTCGTAGAAGTGAACCAAACACTAACAACAATACTGATAAAAAACAATATGAACTTGACCTAGGCCGCATATTGCGGGGGGATGACAACCGAACAACGCTCATGATAAAAAATATTCCCAATAAGTATACTTCAAAGATGCTTCTAGCTGCCATAGATGAGCAATGTCGAGGAACTTATGATTTTCTTCAATTCTACAAATGGTTGCAGAACAAATGTAACGTTGGCTATGCATTCATCAATATGATTGATCCTGGTCAAATTATTCCGTTCCACAAGATAAGAAATATTGTTCAGGCTTTTAATGGGAAAAAATGGGAGAAGTTCAACAGTGAAAAGGTAGCAGTACTCGCCTATGCTCGAATTCAAGGCAAAACTGCTCTTATTGCTCATTTCCAGAATTCAAGCCTGATGAATGAAGATAAACGTTGCCGCCCTATTCTCTTCCATACAGATGGCCCAAATGCTGGTGATCCGGAGCCTTTCCCATTGGGTAACAATATTAGAGTGAGGCCTGGAAAATCTCGCATTAATGGTAATGAGGAGAATCGCAGCCAAGGGAATCCTTCATCTTTGGCAAGTGGAGAAGAGTCTGGGAATGGAATAGAATCTTCATCAAGCTCTTCAAAAAACTCTGACTGA 3354 0.4267 MEFFLAKILKNQLTPIFLSLSLSEDQKKNHLCCCGVRFPLQTRELPPASPSSPVIRSSSPALPEPPFFRFELPIAFAFLTGSFQRSRFRAIICRFPFFFRGGERPGSQCRGREVLVASKSTGSLVSEIPMPWSFLDEECGEFCGGELFGDFVLARMPSEITENRGVSASSHFLDDISYASESIGLRKPKSIHDHFLQGKSEMTASPGSILNTPSPLETNAKTGLPMSQTTQLGEITEDLHFGGEAGTMDMLKDSMESLNYHKRSWSNVHRQPASSPYGLIGKKIVTNAAAREMRVLGNGMLSDKPITVGSLPEEEPYKSLEEIEADTIGNLLPDEDDLFSGVTDELGCSTHTRVNDDFEDFDLFSSGGGMELEGDEHLISGKRTSCVDGDPDYFGVSKGKIPFGEQSSRTLFVRNINSNVEDSELKALFEQYGDIRTIYTACKHRGFVMISYHDLRAAQNAMEALQNRPLRSRKLDIHYSIPKGNAPEKDIGHGTLMISDLDSSVLNDELKHIFGFYGEIREIYEYPQLNHVKFIEFYDVRAAEASLRALNGICFAGKHIKLEPGLPKIATCMMQQSQKGQDEPDLGHSLSDNGSLRHKAGVSSGFYASGGGLENGYNQGFHSAKRLPAFIDNSLFHGNSSIHKTGRGTSAGKVSGVFEASNAVDAMKFASMPRFHPHSLPEYRDSLSNGSPYNYSGTINTAANIGTGSTESSDSRHIQGISSTGNLAEFNAGGNGSHPHHGLYHMWNGSSLHQQSPSNPMLWPQKTPSFVNGACSPRLPQQVPSFPRTPSHVLRASHIDHQVGSAPVVTASPWERQHSYLGESPDTSGLRLGSVGSPGFHGGWQLHSPASHSIFSHVGGNGTELTSNAGQGSPKQLSHVFPGRLPMTLVSKFDSTNERMRNIYPRRSEPNTNNNTDKKQYELDLGRILRGDDNRTTLMIKNIPNKYTSKMLLAAIDEQCRGTYDFLQFYKWLQNKCNVGYAFINMIDPGQIIPFHKIRNIVQAFNGKKWEKFNSEKVAVLAYARIQGKTALIAHFQNSSLMNEDKRCRPILFHTDGPNAGDPEPFPLGNNIRVRPGKSRINGNEENRSQGNPSSLASGEESGNGIESSSSSSKNSD 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9062g00001 1117 SMART rrm1_1 495 563 IPR000504 GO:0003723
Mupr9062g00001 1117 SMART rrm1_1 410 478 IPR000504 GO:0003723
Mupr9062g00001 1117 CDD RRM3_MEI2_like 938 1029 IPR034454 -
Mupr9062g00001 1117 Gene3D - 493 590 IPR012677 -
Mupr9062g00001 1117 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 496 561 IPR000504 GO:0003723
Mupr9062g00001 1117 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 411 475 IPR000504 GO:0003723
Mupr9062g00001 1117 FunFam MEI2-like protein 5 isoform 2 398 492 - -
Mupr9062g00001 1117 SUPERFAMILY RNA-binding domain, RBD 406 566 IPR035979 GO:0003676
Mupr9062g00001 1117 Gene3D - 403 492 IPR012677 -
Mupr9062g00001 1117 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 409 482 IPR000504 GO:0003723
Mupr9062g00001 1117 MobiDBLite consensus disorder prediction 1052 1117 - -
Mupr9062g00001 1117 Pfam RNA recognition motif 2 935 1037 IPR007201 -
Mupr9062g00001 1117 CDD RRM1_MEI2_like 408 483 IPR034453 -
Mupr9062g00001 1117 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 494 567 IPR000504 GO:0003723
Mupr9062g00001 1117 SUPERFAMILY RNA-binding domain, RBD 937 1027 IPR035979 GO:0003676
Mupr9062g00001 1117 FunFam Protein MEI2-like 1 493 587 - -
Mupr9062g00001 1117 PANTHER RNA RECOGNITION MOTIF-CONTAINING 262 1114 - -
Mupr9062g00001 1117 MobiDBLite consensus disorder prediction 1083 1117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9062g00001 Mupr-Chr9062 18496 27216 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9062g00001 404 560 Eukaryotic Initiation Factors Gene Family AT3G16380 26.404 1.82e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9062g00001 - - gmx:100797616 1661.74