Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mupr9062g00001 | ATGGAATTTTTTTTAGCAAAAATACTGAAAAACCAACTAACACCCATTTTCCTCTCTCTTTCTCTGTCAGAAGACCAAAAAAAAAACCACCTCTGTTGTTGCGGTGTCCGTTTTCCTCTCCAAACCAGAGAGCTACCGCCGGCGAGCCCGTCCTCGCCGGTAATTCGCTCTTCGTCGCCGGCGCTGCCGGAACCTCCATTTTTTCGATTTGAGCTTCCAATTGCGTTTGCTTTTCTCACAGGCTCCTTTCAGAGGAGTCGTTTTCGTGCAATAATTTGTCGTTTTCCCTTCTTTTTTCGCGGCGGAGAGCGTCCGGGATCGCAATGCAGAGGGAGGGAGGTTCTTGTTGCGTCGAAAAGCACGGGATCTCTAGTTTCTGAAATTCCTATGCCTTGGAGCTTTCTGGATGAGGAGTGTGGTGAATTTTGTGGAGGAGAGCTTTTTGGAGATTTTGTTCTAGCGAGGATGCCTTCTGAAATAACGGAGAATAGGGGTGTTTCTGCCTCATCCCACTTTTTGGATGACATTTCCTATGCTTCGGAGAGTATTGGATTAAGGAAGCCAAAATCTATTCATGACCATTTTCTACAAGGGAAGAGTGAAATGACGGCATCACCTGGCAGCATTTTGAATACTCCATCACCCCTTGAAACAAATGCAAAAACAGGCTTGCCAATGTCTCAGACTACTCAATTGGGTGAAATCACAGAAGACCTACATTTTGGTGGAGAAGCAGGCACTATGGATATGCTGAAGGATTCCATGGAATCATTGAATTATCACAAGAGATCATGGTCTAATGTGCATAGGCAGCCAGCATCTAGCCCATATGGTTTAATTGGGAAGAAGATTGTCACCAATGCTGCTGCACGAGAAATGAGAGTATTGGGGAATGGCATGCTGTCTGATAAACCCATTACTGTTGGTTCCCTTCCTGAGGAAGAACCGTATAAATCTCTTGAAGAAATTGAGGCTGACACTATTGGAAATCTCCTTCCTGATGAAGATGACCTGTTTTCTGGAGTCACTGATGAGTTAGGATGCAGTACTCACACTAGAGTGAATGATGATTTTGAAGATTTTGATTTGTTCAGCAGTGGTGGAGGCATGGAGTTGGAAGGAGATGAACATCTAATTTCCGGAAAAAGAACCAGTTGTGTAGATGGAGATCCTGATTACTTTGGAGTTTCTAAAGGAAAAATTCCTTTTGGTGAACAATCTTCTAGAACACTTTTTGTTAGAAACATCAATAGCAATGTAGAAGACTCTGAGCTAAAGGCTCTCTTTGAGCAATATGGAGATATCCGAACCATATATACTGCCTGCAAGCATCGTGGGTTTGTTATGATTTCTTATCATGACCTAAGGGCAGCACAAAATGCAATGGAAGCACTTCAAAATAGGCCATTGAGATCTAGGAAACTTGATATACATTATTCAATTCCAAAGGGCAATGCTCCAGAGAAGGATATTGGCCATGGGACGCTGATGATATCTGATCTTGATTCATCTGTTTTGAATGATGAACTTAAACATATTTTTGGGTTTTATGGAGAAATTAGAGAGATCTATGAATATCCACAATTGAATCATGTCAAATTTATCGAATTTTATGATGTCCGAGCTGCGGAAGCTTCTCTTCGTGCATTGAATGGGATCTGCTTTGCTGGGAAGCATATCAAGCTTGAACCTGGCCTTCCCAAGATTGCAACATGCATGATGCAGCAGTCTCAGAAGGGACAAGATGAACCTGATCTTGGTCATAGTTTGAGTGACAATGGATCCTTACGACATAAGGCAGGAGTGTCATCTGGATTTTATGCATCTGGTGGCGGCTTGGAAAATGGATATAATCAGGGATTTCACTCGGCAAAACGGCTACCTGCTTTTATTGACAACTCATTGTTTCATGGGAATTCTAGCATTCACAAGACCGGAAGAGGGACATCTGCTGGAAAAGTATCTGGTGTTTTTGAGGCCAGTAATGCTGTTGATGCAATGAAATTTGCATCCATGCCAAGGTTCCATCCTCATTCTTTACCTGAATATCGTGATAGTTTATCTAATGGCAGTCCTTACAACTATTCGGGTACCATTAACACGGCTGCCAATATTGGTACTGGATCGACGGAATCATCTGACAGCAGGCACATTCAAGGAATAAGCTCAACTGGAAACCTAGCAGAGTTTAATGCAGGAGGAAATGGGAGTCACCCCCATCATGGACTTTATCATATGTGGAATGGCTCCAGCTTGCATCAGCAATCTCCATCAAATCCCATGCTTTGGCCACAGAAAACACCATCCTTTGTTAATGGTGCTTGTTCTCCACGTCTTCCACAACAGGTGCCCAGCTTTCCTAGAACACCATCTCATGTGCTGAGAGCATCACATATAGACCATCAAGTGGGATCAGCACCAGTTGTTACAGCCTCACCTTGGGAAAGACAACATTCTTACTTGGGAGAGTCACCTGACACTTCTGGTTTAAGATTGGGTTCTGTAGGAAGTCCAGGTTTTCATGGTGGCTGGCAGTTGCATTCTCCGGCTTCTCACAGCATATTTTCTCATGTTGGTGGGAATGGTACAGAATTGACGTCAAATGCTGGACAGGGTTCTCCTAAGCAATTGTCACATGTTTTCCCTGGGAGACTTCCCATGACTTTGGTTTCTAAATTTGACTCTACCAATGAACGAATGAGAAACATCTATCCTCGTAGAAGTGAACCAAACACTAACAACAATACTGATAAAAAACAATATGAACTTGACCTAGGCCGCATATTGCGGGGGGATGACAACCGAACAACGCTCATGATAAAAAATATTCCCAATAAGTATACTTCAAAGATGCTTCTAGCTGCCATAGATGAGCAATGTCGAGGAACTTATGATTTTCTTCAATTCTACAAATGGTTGCAGAACAAATGTAACGTTGGCTATGCATTCATCAATATGATTGATCCTGGTCAAATTATTCCGTTCCACAAGATAAGAAATATTGTTCAGGCTTTTAATGGGAAAAAATGGGAGAAGTTCAACAGTGAAAAGGTAGCAGTACTCGCCTATGCTCGAATTCAAGGCAAAACTGCTCTTATTGCTCATTTCCAGAATTCAAGCCTGATGAATGAAGATAAACGTTGCCGCCCTATTCTCTTCCATACAGATGGCCCAAATGCTGGTGATCCGGAGCCTTTCCCATTGGGTAACAATATTAGAGTGAGGCCTGGAAAATCTCGCATTAATGGTAATGAGGAGAATCGCAGCCAAGGGAATCCTTCATCTTTGGCAAGTGGAGAAGAGTCTGGGAATGGAATAGAATCTTCATCAAGCTCTTCAAAAAACTCTGACTGA | 3354 | 0.4267 | MEFFLAKILKNQLTPIFLSLSLSEDQKKNHLCCCGVRFPLQTRELPPASPSSPVIRSSSPALPEPPFFRFELPIAFAFLTGSFQRSRFRAIICRFPFFFRGGERPGSQCRGREVLVASKSTGSLVSEIPMPWSFLDEECGEFCGGELFGDFVLARMPSEITENRGVSASSHFLDDISYASESIGLRKPKSIHDHFLQGKSEMTASPGSILNTPSPLETNAKTGLPMSQTTQLGEITEDLHFGGEAGTMDMLKDSMESLNYHKRSWSNVHRQPASSPYGLIGKKIVTNAAAREMRVLGNGMLSDKPITVGSLPEEEPYKSLEEIEADTIGNLLPDEDDLFSGVTDELGCSTHTRVNDDFEDFDLFSSGGGMELEGDEHLISGKRTSCVDGDPDYFGVSKGKIPFGEQSSRTLFVRNINSNVEDSELKALFEQYGDIRTIYTACKHRGFVMISYHDLRAAQNAMEALQNRPLRSRKLDIHYSIPKGNAPEKDIGHGTLMISDLDSSVLNDELKHIFGFYGEIREIYEYPQLNHVKFIEFYDVRAAEASLRALNGICFAGKHIKLEPGLPKIATCMMQQSQKGQDEPDLGHSLSDNGSLRHKAGVSSGFYASGGGLENGYNQGFHSAKRLPAFIDNSLFHGNSSIHKTGRGTSAGKVSGVFEASNAVDAMKFASMPRFHPHSLPEYRDSLSNGSPYNYSGTINTAANIGTGSTESSDSRHIQGISSTGNLAEFNAGGNGSHPHHGLYHMWNGSSLHQQSPSNPMLWPQKTPSFVNGACSPRLPQQVPSFPRTPSHVLRASHIDHQVGSAPVVTASPWERQHSYLGESPDTSGLRLGSVGSPGFHGGWQLHSPASHSIFSHVGGNGTELTSNAGQGSPKQLSHVFPGRLPMTLVSKFDSTNERMRNIYPRRSEPNTNNNTDKKQYELDLGRILRGDDNRTTLMIKNIPNKYTSKMLLAAIDEQCRGTYDFLQFYKWLQNKCNVGYAFINMIDPGQIIPFHKIRNIVQAFNGKKWEKFNSEKVAVLAYARIQGKTALIAHFQNSSLMNEDKRCRPILFHTDGPNAGDPEPFPLGNNIRVRPGKSRINGNEENRSQGNPSSLASGEESGNGIESSSSSSKNSD | 1117 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mupr9062g00001 | 1117 | SMART | rrm1_1 | 495 | 563 | IPR000504 | GO:0003723 | |
Mupr9062g00001 | 1117 | SMART | rrm1_1 | 410 | 478 | IPR000504 | GO:0003723 | |
Mupr9062g00001 | 1117 | CDD | RRM3_MEI2_like | 938 | 1029 | IPR034454 | - | |
Mupr9062g00001 | 1117 | Gene3D | - | 493 | 590 | IPR012677 | - | |
Mupr9062g00001 | 1117 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 496 | 561 | IPR000504 | GO:0003723 | |
Mupr9062g00001 | 1117 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 411 | 475 | IPR000504 | GO:0003723 | |
Mupr9062g00001 | 1117 | FunFam | MEI2-like protein 5 isoform 2 | 398 | 492 | - | - | |
Mupr9062g00001 | 1117 | SUPERFAMILY | RNA-binding domain, RBD | 406 | 566 | IPR035979 | GO:0003676 | |
Mupr9062g00001 | 1117 | Gene3D | - | 403 | 492 | IPR012677 | - | |
Mupr9062g00001 | 1117 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 409 | 482 | IPR000504 | GO:0003723 | |
Mupr9062g00001 | 1117 | MobiDBLite | consensus disorder prediction | 1052 | 1117 | - | - | |
Mupr9062g00001 | 1117 | Pfam | RNA recognition motif 2 | 935 | 1037 | IPR007201 | - | |
Mupr9062g00001 | 1117 | CDD | RRM1_MEI2_like | 408 | 483 | IPR034453 | - | |
Mupr9062g00001 | 1117 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 494 | 567 | IPR000504 | GO:0003723 | |
Mupr9062g00001 | 1117 | SUPERFAMILY | RNA-binding domain, RBD | 937 | 1027 | IPR035979 | GO:0003676 | |
Mupr9062g00001 | 1117 | FunFam | Protein MEI2-like 1 | 493 | 587 | - | - | |
Mupr9062g00001 | 1117 | PANTHER | RNA RECOGNITION MOTIF-CONTAINING | 262 | 1114 | - | - | |
Mupr9062g00001 | 1117 | MobiDBLite | consensus disorder prediction | 1083 | 1117 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mupr9062g00001 | Mupr-Chr9062 | 18496 | 27216 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mupr9062g00001 | 404 | 560 | Eukaryotic Initiation Factors Gene Family | AT3G16380 | 26.404 | 1.82e-09 | 59.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mupr9062g00001 | - | - | gmx:100797616 | 1661.74 |