Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9039g00003 ATGAAGAGATTGAGGTCGAGCGACGATCTCCACTCGTACGGCGGCGACAAGAGCAATGGCTGCAAGGATTCGAATAACCTGAACCGTTCGTTTTCCTCGGCGCAGCGGAGCTTCTACTACAAGGCGGAGAATGCGCGGAAGGGCGTGGTGTCGTCGTCGTCGTCATCGCGATACGAGAGGGATCGGACGGCGGAGGAGGATCGGGAGGGTTCGAGGTTGGTTCGGAAGCGATCGGAGCACGATTTCGAGGGTTTCGATCGGAGGAAGGGGTTCGATCGGTACAGGGAGAGCGAGAGGGGTTTGATTCACCGGTCGGAGAGTTTCTCCGGCGGGTCGCGGCGGGATCCGTTTCCGAAGGGGTTCCGGTCGGAGAGGGAGCGGTCGCGAAGGGAGGGGAGCGTGTCGTCGTGGCGGAGAGGGATGAAGGATTTGGATGAGAGAGACTGGGAGAGAGTGGTGCGTTCCCCTAAGGGTTTGAGGGATGTGAAGTCTCCCTCGTGGTCTAAGGATTCTATTTCTGAGAGCGACCAATCTAAGAAGAGATCTTCTTCTCCGAGGCCCTTCAGAGATGCTAACTCCAACAAGTCTAAGTCTAAGTCTCCCACTTGGTCTAAGGATTCTATTTCTGAGAGCGAGCAGTCCAAGAGTGTTGAGGTGAAGAAGACTGAGGAGGAGTTGTTGCAGCAGGTTCAGAGCGGAAGTAGCAGTGAGATGGAAGAAGGGGAGCTCGAGCCTGAACCCCAAACTGAACCGGTTCTTCCTGCAACTGAAGACTTGCCCTCTGTTACTGATGATGACAAGCAAGTTCAGAAGAATGAATGTCACCCTGATACCCCCATGGAGGAAAGAGAGGAGTTGTTGGGTAAGGAAGAAGCGAAACCCAATGAGGAGGTTGGTTGTGAGGTAGAGGATGAAGAGAATGATGCTGATAAGCTGCCGGATGTTCAGGATGATCCGACTGAGAAAATGCTTGCTCCGGGGACTGAACTTGGGTCCGCAGGTAATGGTGATGATGATAAAAAGGAGGAGTGTTTGGATGCTGATGCTGAGTGCAAGGAGGAAACAAACAAGGGTGCGGATGTGGAGGAGGTTTTGTTGAATGAAGAGGAGTGTAAGCAGGACAAGGGTGTAGATCTAGGAACCAGCACGGCTGCTGTCAAACCTGAGTCAAATGATGTAGTTTTAACAGAAAATGAAGTTCCCAAGGAAGTGAATAGAGAAATGATGATGGAGGGTGTGGTCAGCAGTGCAAAGGATAAAGGCAAAGGCGTGTCTGTTGCACTTGCACCTACTGATGTTTCTCATTCTTCAGAAGATGGCTTGTGGATGGATAAATGGGCGAGAGACCTCCCAACATGTTCTGTTGATGTTATAGAAGGTCCAAGCACCAGGGGATTCGAGTTGTTTTCCAGATCTCCTGTTAGGAAAGTGGAGAAAGTAGACCACTCAGTTTTCAGCAAGCACAAGGATGACATGGAGCAGCTTGATCTTACTCTTAGCTTGCCTAATGTTTTGTTACCTATTGGTGCTCATGAGACAACAACTCAAGCCCCTGGATCCCCTAGTCAAACACGGAGTGTGCAGTCTTTAAGTAATACATTTTGTTCTAACTCAGATGGCTTTACTGCATCAATGTCCTTTTCAGGTTCCCAATCATTCTATCACAATCCAAGCTGTTCTCTGACAAAAAATTCAGTAGACTATGAACAATCTGTTGGCAGTCGTCCCCTATTCCAGGGAATAGATCAAATTTCCCAGGGGTGTTGGCAAGGCCAGTCTCAGAGTGATCCCAAACAGAAAGAAGTTCCTTTTGGTCAAAGAACCTCAGTGAACGGAAATGGCTCCCTTTACCAGTCTCAGGCGTCATGGGGTGTTTTAGACAGTCAAGCTGTGAAGGGTCAACATTCCAGGGTTCTAGAAGGAAGTTCAAAAATGGGCAGTGGACTTGACAGGCAATTGAGTTTTCATAAGCAGCTTTCAGGACAGTCAAGACGCCACGATGATGTTAGATCTCCTTCACAGAGTGTTGGGTCTCATGATATTGGATCAAATTATAGCTTTGAGAAAAAGAGGGAGGTTAGAGACAGGAGCAGTGGTAGTCTGTACCGAACTACTAGCCAGAAGGATCAAGAACAACTTCTGATGGGTGGAGTTGATTTTGTTGAGACCATCATTGCAAGAATAGTTTCTGAACCTGTTCATGTAATGTCCAGAAAGTTTCATGAAATGACCGGACAGTCAATAGGATGCCTGAAAGAGGGTATTCGTGAAATCATGCTCAATGCTGATAAGCATGGGCAGATACTTGCTTTTCAGAAAGTTCTGCAGAACAGGTCTGATATAATCTTGGATGTCCTACTGAAGTGCCACCGAGTGCAACTGGAAATTTTGGTTGCTTTGAAAACTGGTTTAACTCATTTTCTTAACCTAGACAGCAGCATTTCATCTTCTGAGTTGGCTCAAATTTTTCTGAACTTAAGGTGTAAGAATCTTTCATGTCGAAGTCAGTTGCCTGTGGATGAATGTGATTGCAAGGTTTGTGCACAGAAGAATGGTTTTTGCAGGGATTGTATGTGCCTTATGTGTTCTAAGTTTGACAATGCCTCAAATACATGTAGTTGGGTTGGATGTGATGTTTGCCTTCACTGGTGCCATACTGACTGTGGATTACGGGAATCATTTATTAGAAATGGGCATGGGACAAAAGGGATGACTGAGATGCAGTTTCACTGTATTGCTTGTGATCATCCTTCTGAGATGTTTGGCTTTGTCAAGGAGGTGTTTCAAAATTTTGCAAAAGAATGGTCAGTGGAAACCCTTTGCAAAGAACTTGAATATGTAAAGAGAATTTTTTCTGCCAGCAAGGATATGAGAGGGAGACAGCTGCATGAGATTGCAGAGCAAATGCTGCCAAGGTTGGCAAACAAGTCTAATCTTCCAGAGGTTTTGAGGCACATCATGGCTTTTCTTTCGGATGGTGATTCTTCCAAATTACCCATGACAGCAAACTTTTCTGGGAAGGAACAGATTAAAGGAAACAATGGAGTAGCTGGGCCCAGCCAGGAAGCGGCTTGGATGAAATCTATTTATTCAGAAAAGCCACCTCTGTTAGAAAGGCCTGCAAACATGCTTCCTACCTTTGACCAGAATGATAAAAGAACTCTTGTGCAAGAGTTGCAGATGAGTAGTCTCCAGAAGGACTTCTGTTTTGATGAATTGGAGAGTGTAGTAAAAATTAAGCAGGCAGAGGCCAAAATGTTTCAATCACGTGCTGATGATGCCAGAAGAGAAGCTGAAGGGTTGAAGCGCATTGCCCTTGCAAAGAATGAGAAAATTGAGGAAGAATATACCAATCGAATTGCCAAGTTGCGGTTGACCGAGACTGATGAAATTCGTAAACAAAAATTTGAAGAACTCCAAGCATTAGAGAGGGCACATCTGGAGTATTTGAACATGAAAAGGAGAATGGAGTCAGACATTAAAGATCTGTTATCCAAAATGGAAGCTACTAAAATGAGTCTTGCCATATACGTTATTTACTAA 3543 0.4581 MKRLRSSDDLHSYGGDKSNGCKDSNNLNRSFSSAQRSFYYKAENARKGVVSSSSSSRYERDRTAEEDREGSRLVRKRSEHDFEGFDRRKGFDRYRESERGLIHRSESFSGGSRRDPFPKGFRSERERSRREGSVSSWRRGMKDLDERDWERVVRSPKGLRDVKSPSWSKDSISESDQSKKRSSSPRPFRDANSNKSKSKSPTWSKDSISESEQSKSVEVKKTEEELLQQVQSGSSSEMEEGELEPEPQTEPVLPATEDLPSVTDDDKQVQKNECHPDTPMEEREELLGKEEAKPNEEVGCEVEDEENDADKLPDVQDDPTEKMLAPGTELGSAGNGDDDKKEECLDADAECKEETNKGADVEEVLLNEEECKQDKGVDLGTSTAAVKPESNDVVLTENEVPKEVNREMMMEGVVSSAKDKGKGVSVALAPTDVSHSSEDGLWMDKWARDLPTCSVDVIEGPSTRGFELFSRSPVRKVEKVDHSVFSKHKDDMEQLDLTLSLPNVLLPIGAHETTTQAPGSPSQTRSVQSLSNTFCSNSDGFTASMSFSGSQSFYHNPSCSLTKNSVDYEQSVGSRPLFQGIDQISQGCWQGQSQSDPKQKEVPFGQRTSVNGNGSLYQSQASWGVLDSQAVKGQHSRVLEGSSKMGSGLDRQLSFHKQLSGQSRRHDDVRSPSQSVGSHDIGSNYSFEKKREVRDRSSGSLYRTTSQKDQEQLLMGGVDFVETIIARIVSEPVHVMSRKFHEMTGQSIGCLKEGIREIMLNADKHGQILAFQKVLQNRSDIILDVLLKCHRVQLEILVALKTGLTHFLNLDSSISSSELAQIFLNLRCKNLSCRSQLPVDECDCKVCAQKNGFCRDCMCLMCSKFDNASNTCSWVGCDVCLHWCHTDCGLRESFIRNGHGTKGMTEMQFHCIACDHPSEMFGFVKEVFQNFAKEWSVETLCKELEYVKRIFSASKDMRGRQLHEIAEQMLPRLANKSNLPEVLRHIMAFLSDGDSSKLPMTANFSGKEQIKGNNGVAGPSQEAAWMKSIYSEKPPLLERPANMLPTFDQNDKRTLVQELQMSSLQKDFCFDELESVVKIKQAEAKMFQSRADDARREAEGLKRIALAKNEKIEEEYTNRIAKLRLTETDEIRKQKFEELQALERAHLEYLNMKRRMESDIKDLLSKMEATKMSLAIYVIY 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9039g00003 1180 MobiDBLite consensus disorder prediction 100 342 - -
Mupr9039g00003 1180 MobiDBLite consensus disorder prediction 297 312 - -
Mupr9039g00003 1180 MobiDBLite consensus disorder prediction 657 706 - -
Mupr9039g00003 1180 Coils Coil 1139 1159 - -
Mupr9039g00003 1180 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 778 793 IPR004082 -
Mupr9039g00003 1180 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 739 761 IPR004082 -
Mupr9039g00003 1180 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 793 808 IPR004082 -
Mupr9039g00003 1180 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 865 885 IPR004082 -
Mupr9039g00003 1180 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 935 954 IPR004082 -
Mupr9039g00003 1180 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1071 1091 IPR004082 -
Mupr9039g00003 1180 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 819 840 IPR004082 -
Mupr9039g00003 1180 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1110 1132 IPR004082 -
Mupr9039g00003 1180 CDD PHD_OBE1_like 858 914 IPR047578 -
Mupr9039g00003 1180 Pfam Coiled-coil region of Oberon 1048 1164 IPR032535 -
Mupr9039g00003 1180 MobiDBLite consensus disorder prediction 117 158 - -
Mupr9039g00003 1180 MobiDBLite consensus disorder prediction 58 79 - -
Mupr9039g00003 1180 Pfam PHD - plant homeodomain finger protein 828 948 IPR032881 -
Mupr9039g00003 1180 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1173 IPR004082 -
Mupr9039g00003 1180 MobiDBLite consensus disorder prediction 260 296 - -
Mupr9039g00003 1180 MobiDBLite consensus disorder prediction 588 613 - -
Mupr9039g00003 1180 MobiDBLite consensus disorder prediction 187 210 - -
Mupr9039g00003 1180 MobiDBLite consensus disorder prediction 1 16 - -
Mupr9039g00003 1180 MobiDBLite consensus disorder prediction 684 698 - -
Mupr9039g00003 1180 Coils Coil 1077 1115 - -
Mupr9039g00003 1180 MobiDBLite consensus disorder prediction 42 79 - -
Mupr9039g00003 1180 MobiDBLite consensus disorder prediction 1 28 - -
Mupr9039g00003 1180 MobiDBLite consensus disorder prediction 211 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9039g00003 Mupr-Chr9039 24152 29867 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9039g00003 828 973 PHD Gene Family AT5G57380 27.397 2.06e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9039g00003 - - gmx:100817003 1941.78