Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr901g00008 ATGGTGAAACCAACCATGGATTCTCCTTGTAATAATATTGAGTCATCATGCGATAGTAGTAGTAAGATGTACAAAGGGGTGAGAAAGAGAAAATGGGGAAAATGGGTATCAGAAATTAGGCTTCCCAACAGCCGCGAGCGCATATGGTTGGGCTCTTACGACACCCAAGAGAAGGCCGCCAGGGCCTTCGATGCTGCCCTCTACTGCCTACGTGGCAAGACTGCCACTTTCAACTTCCCCGACACTCCTCACAACTTGGAGACCAATGTGGTCGTGCTGCCTCGCCAATCTCTTTCTCCCCAACAGATTCAAGAGGTGGCTGCCAACTTCGCTAACATCCACCCACCTACGGACACTGCTTCCCAAGAACAGGAACCATCATCCAACTCACCAAGTGAATCCAAATCCAACAATACCTTAGACACTGTGCAAGTTGACCAAGGGGACTTGTTCGACCCCACCGATTGGACCTTTTATAATACCTTTGATGATGACTTTAATGACCTCTATTTTGGCCCAGCTACGACTACACTTTATATCAAATCCACCGTACACCATGCCATAAATATTATGGAAAGTGGCCCGCACTGGAATCCTTTGAAGTAA 606 0.4736 MVKPTMDSPCNNIESSCDSSSKMYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTQEKAARAFDAALYCLRGKTATFNFPDTPHNLETNVVVLPRQSLSPQQIQEVAANFANIHPPTDTASQEQEPSSNSPSESKSNNTLDTVQVDQGDLFDPTDWTFYNTFDDDFNDLYFGPATTTLYIKSTVHHAINIMESGPHWNPLK 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr901g00008 201 CDD AP2 24 82 IPR001471 GO:0003700|GO:0006355
Mupr901g00008 201 MobiDBLite consensus disorder prediction 114 139 - -
Mupr901g00008 201 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Mupr901g00008 201 FunFam Ethylene-responsive transcription factor 2 22 81 - -
Mupr901g00008 201 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Mupr901g00008 201 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Mupr901g00008 201 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Mupr901g00008 201 Pfam AP2 domain 24 72 IPR001471 GO:0003700|GO:0006355
Mupr901g00008 201 Gene3D AP2/ERF domain 22 81 IPR036955 GO:0003700|GO:0006355
Mupr901g00008 201 SUPERFAMILY DNA-binding domain 23 81 IPR016177 GO:0003677
Mupr901g00008 201 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr901g00008 Mupr-Chr901 40664 41555 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr901g00008 13 172 AP2-EREBP Transcription Factor Family AT1G19210 48.521 3.40e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr901g00008 AP2 4.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr901g00008 - - gmx:112999363 167.933