Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9012g00003 ATGGTTATTGCATATTTATATGTTGTCGTTATTCCCTGCTGCGATGAAAGAAACAAAGAATTCGAGCGAGGAAGTGTTCCCGCCATGGGAATGGAACGAGTGCAGTGTGCCTATGCCTCTCAGGATGAAGCGTTCGAAATCGGGAAAGAGATGGCGTATCGAGGGCAGCAATACAGCCAGATTTACTTCGCACGCCTTCATTTGATGAGAATCCTCTTGTATTCCCTCGTTCCCAATTGGAAACCTAATTTTCCCGTGTGCACGGTGCTGGAACTGGAAGAGGGCAAGGAGTGTGTCATTGTTGGAACCCTCTATAAACACATGAAGCTCAAACCTTGCATTCTTGATGAGTATTCTAAGCAGAAATCGGTGGTTCCACTCGTCAAGCCGCATAACTTCATGCACCCTGATGATCACCTAGTTTTGGAAGATGAAAGCGGGCGGGTTAAACTGAGTGGGAATCTCATTTTGCCATCTGAATATGTAACAGGAATTGTGGTTGCTTTACTTGGAAAGGAAACGGGGGCAGGTGACTTTTTGGTTCAGGATGTCCTAGATGCTGGCTTACCTCCACAGATAGAGTTTCCCCTTAAATCAAGGGAAGACAAGTATGTTGTTCTTGTGTCAGGGTTAAGTGTTGGGAGCAGCAACTCTAATCCTCTTCAGTTTCAGCTTCTCATTGATCATATCACGGGGCATTTAGGAGATGAGAAGGAGCAAAGTATTGCATCACAAATTGTTCGTGTTGTCTTTGCTGGAAATTTAGTTGAGATACCTCGCGGACTTCTTAATGGACAGAATTTGGCTTCAAAGGATCTCTCAAGGATGGCGGAGCCAATAAAGGAGCTAGATATTCTGTTGAGTCAGATAGCTGCTGGTTTGCCTTTGGATATCATGCCAGGTCCCAGTGACCCTGCTAATTTCTCATTACCACAGCAGTCATTGCATAGATGCCTTTTCCCTGGGTCATCGGCATTTAATACTTTTAGATCTTGTACAAATCCTCATTGTTTTGAGCTTGATAATGTCAGGTTTCTTGGGACATCGGGACAAAATGTAGATGACCTTGAGAAGCATTCAGAGGCAAAAGATAAACTTGAATTCATGGAAAGGACATTAAGATGGAGGCATTTGGCACCCACTGCACCTAATACTCTTGGATGCTATCCTTATACTGATAGGGATCCTTTCTTCATTGAGAGCTGTCCTCATGTTTACTTTGTTGGAAATCAAGATAAATTTGAAACTCGTGTCATAAAGGGATCAGAAGGGCAGTTGGTGAGACTCATATGTGTTCCTAAATTCAGTGAAACTGGAGTTGCTGTTATGCTAAATCTGAGGGATCTTGAATGTCATGCTCTCAGCTTTGGAACTCAATTCAGCTCATAA 1389 0.4334 MVIAYLYVVVIPCCDERNKEFERGSVPAMGMERVQCAYASQDEAFEIGKEMAYRGQQYSQIYFARLHLMRILLYSLVPNWKPNFPVCTVLELEEGKECVIVGTLYKHMKLKPCILDEYSKQKSVVPLVKPHNFMHPDDHLVLEDESGRVKLSGNLILPSEYVTGIVVALLGKETGAGDFLVQDVLDAGLPPQIEFPLKSREDKYVVLVSGLSVGSSNSNPLQFQLLIDHITGHLGDEKEQSIASQIVRVVFAGNLVEIPRGLLNGQNLASKDLSRMAEPIKELDILLSQIAAGLPLDIMPGPSDPANFSLPQQSLHRCLFPGSSAFNTFRSCTNPHCFELDNVRFLGTSGQNVDDLEKHSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPYTDRDPFFIESCPHVYFVGNQDKFETRVIKGSEGQLVRLICVPKFSETGVAVMLNLRDLECHALSFGTQFSS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9012g00003 462 FunFam DNA polymerase delta subunit 2 63 187 - -
Mupr9012g00003 462 FunFam DNA polymerase delta small subunit 190 462 - -
Mupr9012g00003 462 Gene3D - 64 187 - -
Mupr9012g00003 462 Pfam DNA polymerase alpha/epsilon subunit B 205 415 IPR007185 GO:0003677|GO:0006260
Mupr9012g00003 462 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 31 456 IPR024826 -
Mupr9012g00003 462 Pfam DNA polymerase delta subunit OB-fold domain 57 184 IPR040663 -
Mupr9012g00003 462 CDD MPP_PolD2_C 204 456 IPR041863 -
Mupr9012g00003 462 Gene3D - 196 461 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9012g00003 32 461 Core DNA Replication Machinery Family AT2G42120 75.814 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9012g00003 K02328 - gmx:100780072 835.099