Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr900g00002 ATGAATAGGGGAATTGAAGTTCTCTCTCCAGCCTCCTATCTCCAAAATTCCAATTGGTTGTTCCAGGAAAGCAAGGGAGCAAGATGGACTCCAGAAGAGAACAAGCTGTTTGAGAATGCTTTGGCTTACTATGATAAGGACACCCCAGACAGGTGGATGAGGGTGGCAGCCATGATTCCAGGGAAAACTGTTGGTGATGTGATAAAACAGTACAGAGAGCTTGAGGAAGATGTGAGTGTCATTGAAGCAGGTTTGATCCCAGTTCCTGGTTATACTACGAGTTCTTTCACATTGGAGTGGGTTAACAACAACCAAGGCTATGATGACTTCAAGCAATTTTGTAGTGTTGGTGGGAAAAGGGGTGCATCCACTAGGCCATCTGAGCAGGAAAGGAAGAAAGGAGTGCCATGGACTGAAGAGGAGCACAGGCAGTTTCTGCTGGGTCTCAAGAAGTATGGTAAAGGGGACTGGAGAAACATCTCTAAGAACTTTGTGACCACAAGAACTCCCACTCAGGTTGCAAGTCATGCTCAGAAGTACTTCATCAGGCAGCTTACAGGAGGGAAGGATAAGAGGAGATCCAGTATCCATGACATCACAATGGTCAATCTCCAAGAAACAAAATCTCCTTCATTTGACACCACCAGGCCTTCTTCTCCACTACAGAATCAGAAGTTGTCTGGCATGGTTAAACAGGAATATGAGTGGAAATTGCCATGTGAAGGCATGCCAATTGTTTTCAATTCAACAAATGGAAACATGTTCATGTCACCACCACTGCATGGGATTTCTTCCTATGAATCTAGACCACAGGAGCATAATTTATTCAGGCAATCTCCATGGATGCCAGTTTTCACCTTGCAAGTGGAAGCAGTTGATTTGGGCACTAGGCCATGTCATAATATGCTTGGTCTGGAATTGCTGAGTCACACTGCATTTCTCCAAAGTGACACATAA 957 0.4462 MNRGIEVLSPASYLQNSNWLFQESKGARWTPEENKLFENALAYYDKDTPDRWMRVAAMIPGKTVGDVIKQYRELEEDVSVIEAGLIPVPGYTTSSFTLEWVNNNQGYDDFKQFCSVGGKRGASTRPSEQERKKGVPWTEEEHRQFLLGLKKYGKGDWRNISKNFVTTRTPTQVASHAQKYFIRQLTGGKDKRRSSIHDITMVNLQETKSPSFDTTRPSSPLQNQKLSGMVKQEYEWKLPCEGMPIVFNSTNGNMFMSPPLHGISSYESRPQEHNLFRQSPWMPVFTLQVEAVDLGTRPCHNMLGLELLSHTAFLQSDT 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr900g00002 318 MobiDBLite consensus disorder prediction 118 137 - -
Mupr900g00002 318 NCBIfam myb-like DNA-binding domain, SHAQKYF class 132 184 IPR006447 GO:0003677
Mupr900g00002 318 SUPERFAMILY Homeodomain-like 130 184 IPR009057 -
Mupr900g00002 318 FunFam transcription factor MYB1R1 135 186 - -
Mupr900g00002 318 Gene3D - 135 185 - -
Mupr900g00002 318 ProSiteProfiles Myb-like domain profile. 129 181 IPR001005 -
Mupr900g00002 318 Gene3D - 21 88 - -
Mupr900g00002 318 SUPERFAMILY Homeodomain-like 28 82 IPR009057 -
Mupr900g00002 318 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 23 268 IPR043363 -
Mupr900g00002 318 CDD SANT 28 74 IPR001005 -
Mupr900g00002 318 FunFam Transcription factor SRM1 21 88 - -
Mupr900g00002 318 SMART sant 25 77 IPR001005 -
Mupr900g00002 318 SMART sant 133 183 IPR001005 -
Mupr900g00002 318 Pfam Myb-like DNA-binding domain 28 73 IPR001005 -
Mupr900g00002 318 Pfam Myb-like DNA-binding domain 136 181 IPR001005 -
Mupr900g00002 318 ProSiteProfiles SANT domain profile. 137 185 IPR017884 -
Mupr900g00002 318 CDD SANT 136 181 IPR001005 -
Mupr900g00002 318 ProSiteProfiles Myb-like domain profile. 21 75 IPR001005 -
Mupr900g00002 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 129 185 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr900g00002 Mupr-Chr900 26949 29441 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr900g00002 Myb_DNA-binding 2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr900g00002 - - gmx:100806787 551.592