Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8995g00002 ATGGTGCTGCGAAGATGTTATTATTACCCTATTGCTTTTGTGCAATGGGGTTTCTTGGCTTCCTTTCTTTGCTTTTCTGTGGGACTTGAAACCCCAGCCAGATCCTGTGACAAGCAAGATTTGTTGGCCCTGAAGGAATTTGCAGGCAACCTTACAGAAGGGTCTATCATCACATCATGGTCAGATGATGTTGTCTGCTGCAAATGGCATGGAGTTGTTTGCAATGATGTGGTTGATGGAGCATCTTCCAGCAGAGTGTCCAAGTTGATTCTACCTGGAATTGGTCTCAACGGCACGATTTCAAGCTCTTTAGCCTATCTAGATGAGCTCAAGGTGCTTGATCTTTCGTTCAATCGGCTCCAAGGTGGATTGCCTTCTGAGTTCTCTAATTTGAAGCAGTTAGAAGTTCTTGACTTGAGCCATAACATGCTGTCTGGACCAGTTGGTGGGGCACTTTCCGGGTTGCAATCCATTCAGATGCTGAATATTTCTAGCAATTTATTTGTTGGAGACCTCTTCAGTTTCGGAGAGTTTCAACATCTCCTTGCTCTCAACATAAGCAACAACTCATTCACTGACCAGTTCAATTCTCAAATTTGCAGCTCCTCCAAGGGTCTTCATATTCTTGATGTATCCAAAAATCATTTTGCTGGTGGTCTTGGATGGTTGGGAAACTGTAGCACATCTCTCCAAGAGTTGCATTTGGATTCCAATTTATTTTCCGGCCCTCTTCCCGATTCCTTGTATTCAATGTCAGCCTTGGAGCAGCTTTCGGTCTCTATGAACAACTTCTCCGGTTGGTTAAGCAAGGAGCTAAGTAACCTCTCAAGCCTAAAATCTTTAATAGTTTCTGGAAATCAATTTTCAGGAGAACTTCCAAATGTTTTTGGGAATCTTTTGGACCTTGAACAATTAATAGGACACTCCAATTCATTTTCTGGATCATTGCCTTCCACCTTGGCCTTGTGCTCGAAACTTCAAGTGCTTGATCTTCGAAATAATTCTTTGACAGGTTCTGTTGGTCTTGACTTCACTGGGTTGTCTAATCTTTTCACATTGGACCTTGGTAGCAATCATTTTAATGGGTCCCTTCCAAATTCCTTGTCCTATTGCCGTGAATTGACAACGTTAAACCTTCCTAAAAATGACTTAACCGGCCATATCCCTGAGAGCTATGCAAACCTCACTTCACTTTTGACTCTGTCCTTGTCAAACAATAGCTTTGGGAACTTATCTGGGGCGCTTTATGTACTGCAGCAGTGCCAAAATCTCACCACTGTTGTCCTCGCAAGGAATTTCCATGGTGAGGAAATTCCAGAAAGTTTAACAGCAGGCTTCAACAGCCTTGTGGTTTTAGGACTTGGAAATTGTGGTCTCAAAGGCCGTATTCCTGCTTGGCTATTGAAGTGCACGAAATTGGAAGTTCTTGATTTGTCATGGAACCATTTGGAAGGTAGCATCCCTTCTTGGATTGGTTCAATGGGCAATTTGTTCTACTTGGATTTGTCAAATAATTCTCTTACAGGAGAAATACCAAAAGGTTTGACAAATCTGAAGGGCCTCATATCCCCAAATTATCATATATCAAGTCTCTTTGTATCTGCTATTCCTCTCTATGTCAAGAGAAACAAGAGTGATAATGGGCTGCAATATAACCATGCCTCAAGTTTCCCTCCTTCAATATACTTGAGCAATAACAGACTAAGTGGAACAATATGGCCTGAAATTGGTCGTTTAAAAGAACTTCATATCTTAGATTTAAGCAGGAACAACATCACCGGCACCATTCCTAGCTCTATTTCCGAGATGAAGAATTTGGAAACATTAGATTTATCTAATAATAGTCTCTTTGGGACTATTCCTCCATCATTTAACAGCCTCACATTCTTGTCTAAGTTCAGTGTGGCATATAACCACTTACAAGGAACAATTCCAACTGGAGGACAATTTTCAAGTTTCCCAAATTCAAGTTTTGAGGGCAACCTGGGTCTTTGTGGGGAAACATATCAACCTTGTAATGGCAAAAATGTGAGCTTGGGACCCGACATTGCTACTCATTCTGTGGGAAAAATTGGTAAAAGCAGTGTCCTTGGCATAACAATTGGTTTAGGAGTAGGCCTTGCTCTGCTTCTTGCAGAACTTGGCTGGCCAAACAGGATACCTGAAGCACTTGTTTCTTCAAAATTGGTGCTTTTTCAGAACTCAGATTGCAAGGATCTCACAGTTGAAGATTTGTTAAAATGCACTGGTAACTTTGACCAAGAAAATATAATTGGTTGTGGGGGGTTTGGTCTTGTCTACAAGGCAAATCTTCCGAATGGCACAAAGGTAGCTATCAAGAAACTTTCAGGGTACTGTGGTCAGGTGGAACGTGAATTCCAAGCCGAAGTAGAGGCCCTCTCAAGAGCTCAGCATAAGAACCTTGTTTCACTTAAAGGTTATTGTCAGCATGTCAATGACAGATTGTTAATTTACTCCTACTTGGAGAATGGAAGCCTTGATTATTGGCTGCATGAGAGTGAGGATGGAAATTCACCTCTAAAATGGGATGCAAGACTCAAGATTGCACGAGGTGCAGCTCATGGATTAGCTTATTTGCACAAAGAGTGCGAACCGCATATTGTGCATCGAGATATTAAATCTAGCAACATTCTCTTGGATGATAAATTTGAAGCTTATTTGGCTGACTTTGGTCTCTCAAGGCTACTTCAACCCTATGATACCCATGTTTCAACAGATTTAGTAGGAACTTTAGGATATATTCCTCCAGAATATAGTCAGGCACTGAAAGCAACTTTTAAGGGGGATATTTATAGCTTTGGTGTTGTTCTTGTTGAGCTTCTTACTGGTCGAAGGCCTGTAGAAATCATCCTCGGGCAACGCAGCAGGAATCTAGTGTCTTGGGTGTTTCAGATGAAATCTGAGAAAAGGGAGGAAGAAATTTTTGATTCAGTCATTTGGCACAAGGATAATGAGAAACAGCTCTTAGAGGTACTAGCTATTGCTTGTAAATGTGTATATGAAGATCCAAGGGAGAGACCCCATATTGAATTAGTTGTTTCATGGCTTGATAGTGTAGGATTTGATGGTTCTCAACAGTCATCATCCTAA 3111 0.4127 MVLRRCYYYPIAFVQWGFLASFLCFSVGLETPARSCDKQDLLALKEFAGNLTEGSIITSWSDDVVCCKWHGVVCNDVVDGASSSRVSKLILPGIGLNGTISSSLAYLDELKVLDLSFNRLQGGLPSEFSNLKQLEVLDLSHNMLSGPVGGALSGLQSIQMLNISSNLFVGDLFSFGEFQHLLALNISNNSFTDQFNSQICSSSKGLHILDVSKNHFAGGLGWLGNCSTSLQELHLDSNLFSGPLPDSLYSMSALEQLSVSMNNFSGWLSKELSNLSSLKSLIVSGNQFSGELPNVFGNLLDLEQLIGHSNSFSGSLPSTLALCSKLQVLDLRNNSLTGSVGLDFTGLSNLFTLDLGSNHFNGSLPNSLSYCRELTTLNLPKNDLTGHIPESYANLTSLLTLSLSNNSFGNLSGALYVLQQCQNLTTVVLARNFHGEEIPESLTAGFNSLVVLGLGNCGLKGRIPAWLLKCTKLEVLDLSWNHLEGSIPSWIGSMGNLFYLDLSNNSLTGEIPKGLTNLKGLISPNYHISSLFVSAIPLYVKRNKSDNGLQYNHASSFPPSIYLSNNRLSGTIWPEIGRLKELHILDLSRNNITGTIPSSISEMKNLETLDLSNNSLFGTIPPSFNSLTFLSKFSVAYNHLQGTIPTGGQFSSFPNSSFEGNLGLCGETYQPCNGKNVSLGPDIATHSVGKIGKSSVLGITIGLGVGLALLLAELGWPNRIPEALVSSKLVLFQNSDCKDLTVEDLLKCTGNFDQENIIGCGGFGLVYKANLPNGTKVAIKKLSGYCGQVEREFQAEVEALSRAQHKNLVSLKGYCQHVNDRLLIYSYLENGSLDYWLHESEDGNSPLKWDARLKIARGAAHGLAYLHKECEPHIVHRDIKSSNILLDDKFEAYLADFGLSRLLQPYDTHVSTDLVGTLGYIPPEYSQALKATFKGDIYSFGVVLVELLTGRRPVEIILGQRSRNLVSWVFQMKSEKREEEIFDSVIWHKDNEKQLLEVLAIACKCVYEDPRERPHIELVVSWLDSVGFDGSQQSSS 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8995g00002 1036 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 245 340 - -
Mupr8995g00002 1036 Pfam Leucine Rich Repeat 472 492 IPR001611 GO:0005515
Mupr8995g00002 1036 Pfam Leucine Rich Repeat 496 518 IPR001611 GO:0005515
Mupr8995g00002 1036 FunFam Leucine-rich repeat receptor-like protein kinase 828 1034 - -
Mupr8995g00002 1036 SMART serkin_6 752 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8995g00002 1036 ProSiteProfiles Protein kinase domain profile. 752 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8995g00002 1036 FunFam Tyrosine-sulfated glycopeptide receptor 1 344 677 - -
Mupr8995g00002 1036 SUPERFAMILY RNI-like 91 526 - -
Mupr8995g00002 1036 SUPERFAMILY Protein kinase-like (PK-like) 734 1023 IPR011009 -
Mupr8995g00002 1036 ProSitePatterns Protein kinases ATP-binding region signature. 758 781 IPR017441 GO:0005524
Mupr8995g00002 1036 Gene3D Ribonuclease Inhibitor 174 266 IPR032675 -
Mupr8995g00002 1036 Pfam Protein kinase domain 753 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8995g00002 1036 Gene3D Ribonuclease Inhibitor 267 366 IPR032675 -
Mupr8995g00002 1036 Gene3D Ribonuclease Inhibitor 36 173 IPR032675 -
Mupr8995g00002 1036 SMART LRR_typ_2 395 418 IPR003591 -
Mupr8995g00002 1036 SMART LRR_typ_2 275 298 IPR003591 -
Mupr8995g00002 1036 SMART LRR_typ_2 107 130 IPR003591 -
Mupr8995g00002 1036 SMART LRR_typ_2 347 371 IPR003591 -
Mupr8995g00002 1036 SMART LRR_typ_2 603 626 IPR003591 -
Mupr8995g00002 1036 SMART LRR_typ_2 251 274 IPR003591 -
Mupr8995g00002 1036 SMART LRR_typ_2 131 154 IPR003591 -
Mupr8995g00002 1036 SMART LRR_typ_2 494 518 IPR003591 -
Mupr8995g00002 1036 SMART LRR_typ_2 579 602 IPR003591 -
Mupr8995g00002 1036 Gene3D Phosphorylase Kinase; domain 1 719 827 - -
Mupr8995g00002 1036 ProSiteProfiles Leucine-rich repeat profile. 605 627 IPR001611 GO:0005515
Mupr8995g00002 1036 SMART LRR_sd22_2 579 602 - -
Mupr8995g00002 1036 SMART LRR_sd22_2 131 157 - -
Mupr8995g00002 1036 SMART LRR_sd22_2 107 130 - -
Mupr8995g00002 1036 SMART LRR_sd22_2 323 344 - -
Mupr8995g00002 1036 SMART LRR_sd22_2 603 629 - -
Mupr8995g00002 1036 SUPERFAMILY L domain-like 460 666 - -
Mupr8995g00002 1036 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 721 827 - -
Mupr8995g00002 1036 Pfam Leucine rich repeat 581 640 IPR001611 GO:0005515
Mupr8995g00002 1036 Pfam Leucine rich repeat 109 167 IPR001611 GO:0005515
Mupr8995g00002 1036 PRINTS Leucine-rich repeat signature 497 510 - -
Mupr8995g00002 1036 PRINTS Leucine-rich repeat signature 603 616 - -
Mupr8995g00002 1036 ProSiteProfiles Leucine-rich repeat profile. 496 519 IPR001611 GO:0005515
Mupr8995g00002 1036 Gene3D Ribonuclease Inhibitor 371 678 IPR032675 -
Mupr8995g00002 1036 FunFam Leucine-rich repeat receptor-like kinase 39 157 - -
Mupr8995g00002 1036 Pfam Leucine rich repeat N-terminal domain 38 75 IPR013210 -
Mupr8995g00002 1036 Gene3D Transferase(Phosphotransferase) domain 1 828 1030 - -
Mupr8995g00002 1036 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 223 340 - -
Mupr8995g00002 1036 ProSitePatterns Serine/Threonine protein kinases active-site signature. 874 886 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8995g00002 Mupr-Chr8995 5952 9122 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8995g00002 41 1035 Receptor kinase-like Gene Family AT1G55610 33.512 2.88e-158 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mupr8995g00002 Pkinase 1.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8995g00002 - - gmx:100789534 1736.47