Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8986g00005 TGGGTAGCAAGCCCCCAACAACCTTCCGCAGCCTACGGTAGAGACGGCGTTGAAGTCAAACCTTTCTTCCTTCCTAACCTTTTCTCTCTCTCTTTCTTAATTGCAGCAGCATACTTGCAAATTGCAGGTTTTCTTCCTTTGCTTTCCTTTTACTCATTATCTCTATCCCTTCGCACAACAGCAAGAGCTACTAGAAAGATCCATTCGGTAATGGACGGAGCGCCACCGCCCGGCGCAGCCGGAGCCGGAGGTCCAGCGCCGTTCCTTCTGAAGACCTACGACATGGTGGACGATCCCTCCACCAACGACATCGTTTCGTGGAGCTCTGCCAATAACAGCTTCGTCGTTTGGAACCCGCCTGAGTTCGCTCGCGTTCTTCTCCCTACCTATTTCAAGCACAACAACTTCTCCAGCTTCATCCGCCAGCTTAATACCTATGGATTTCGAAAAATACATCCAGAGCGATGGGAATTTGCTAATGACGAGTTTGTGAAAGATCAAAAGCATCTTCTTAAGAATATACATCGCAGGAAACCTATCCACAGTCACAGTCATCCTCCAGGTTCTCTTGTAGATCCAGAAAGGGCAGCATTTGAGGAAGAAATAGATAAACTTTCCCGTGAGAAAACTTCTCTTGAATCCAATATTTATAACTTCCAACAACATCGATCAACAGCAAAGGTTCAGCTAGAAGATTTTCTGCAGCGATTAGATGGAGTTGAGAAGAGGCAGAAGCAATTGCTGATCTTCTTTGAGAAGGCTCTTCAGAATCCTACTTTTGTTGAACATCTTTCACGCAAAATTGAGTCCACGGATTTATCGGCATATAATAAAAAACGGCGATTGCCTCAGGTTGATCACGTGCAACCAGTTGCTGAAAGTAGCTTGGTGGACAGTCATAGCAATTTTAGAGTGGAATTTGGAAATGTTTTTCATCAAGATTTCTCGAGTAAACTCAGACTGGAATTGTCACCAGCTGTTTCAGATATGAACTTAGTATCGCATAGCACACAGAGTTCAAATGAAGATGGGGAAAGCCCACAGAAAAAGCTGTCTGAAGTAGAACCAAAAGGAGCGCAGACAAGAACAGCTCTTACATTTGCACCCGAAACATTAGAGCTTGCAGATACTGGGGCCTCTTTTACTTTTAAGATGGATTCGTGTTTATCGCGAAGAGCAACAGCCGCCGAGAGCTCAAAACTGCACTCTTTGGAGCCAAGTAGTGAAGAAGGTGATAGTCATATATCCTGCCAACTAAATTTAACTCTGGCATCTTGTCCATTGCGAGTCAACAGAAATTCATACTCAGCCAGATCACCGCAAATAGACTGTCAAGAAATTGGCAAATTGGCAGAATCAAGATTTTTTGCCAATGGTAAAGAATCTGATAGTGGTGTTTCCTCAAACCGAAATGTAGCTGCCGAGGCTACCAATTTAGCTTCATCACAGGAGGCTCCAAGTAACAACCAAGTTAACCCTGCTCCTCCAGACAGAGTGAATGATGTTTTCTGGGAACAGTTTCTTACTGAAAGGCCAGGCTGTTCTGACAACGAGGAGGCAATGTCCAACTACCGAGCAAACCCATGTGATGAACAAGACGAAGGGCGGGCGGTTCATGGAATCTCTAGAAACATTAAGAACATGGATCAACTCACACTC 1659 0.4467 WVASPQQPSAAYGRDGVEVKPFFLPNLFSLSFLIAAAYLQIAGFLPLLSFYSLSLSLRTTARATRKIHSVMDGAPPPGAAGAGGPAPFLLKTYDMVDDPSTNDIVSWSSANNSFVVWNPPEFARVLLPTYFKHNNFSSFIRQLNTYGFRKIHPERWEFANDEFVKDQKHLLKNIHRRKPIHSHSHPPGSLVDPERAAFEEEIDKLSREKTSLESNIYNFQQHRSTAKVQLEDFLQRLDGVEKRQKQLLIFFEKALQNPTFVEHLSRKIESTDLSAYNKKRRLPQVDHVQPVAESSLVDSHSNFRVEFGNVFHQDFSSKLRLELSPAVSDMNLVSHSTQSSNEDGESPQKKLSEVEPKGAQTRTALTFAPETLELADTGASFTFKMDSCLSRRATAAESSKLHSLEPSSEEGDSHISCQLNLTLASCPLRVNRNSYSARSPQIDCQEIGKLAESRFFANGKESDSGVSSNRNVAAEATNLASSQEAPSNNQVNPAPPDRVNDVFWEQFLTERPGCSDNEEAMSNYRANPCDEQDEGRAVHGISRNIKNMDQLTL 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8986g00005 553 SMART hsfneu3 84 177 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr8986g00005 553 FunFam Heat shock transcription factor 1 81 178 - -
Mupr8986g00005 553 SUPERFAMILY "Winged helix" DNA-binding domain 84 177 IPR036390 -
Mupr8986g00005 553 Pfam HSF-type DNA-binding 88 177 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr8986g00005 553 ProSitePatterns HSF-type DNA-binding domain signature. 127 151 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr8986g00005 553 Gene3D - 83 178 IPR036388 -
Mupr8986g00005 553 MobiDBLite consensus disorder prediction 333 360 - -
Mupr8986g00005 553 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 79 346 IPR027725 -
Mupr8986g00005 553 Coils Coil 195 215 - -
Mupr8986g00005 553 PRINTS Heat shock factor (HSF) domain signature 139 151 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr8986g00005 553 PRINTS Heat shock factor (HSF) domain signature 88 111 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr8986g00005 553 PRINTS Heat shock factor (HSF) domain signature 126 138 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8986g00005 Mupr-Chr8986 31700 34257 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8986g00005 88 553 HSF AT4G13980 55.180 7.30e-169 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mupr8986g00005 HSF_DNA-bind 1e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8986g00005 K09419 - gmx:100816484 883.248