Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr897g00001 ATGTGTGATGATGAAAGCAACGAAGCAGGAGCAAACAAATTTGATCAGAAGCAGACAATTGCAAAGTCTGAAGGGAAAAAATTGGGTATCATGGAGATTGTGATTTCCTTGATCATACTCTTTGGGGGGATTGCCGTTTTGGTGGTTATCCATGTGTGCGTGGTGGGGAGGGCTTTCAGAGGGGACAACAATCGAGGTAGTGACCAAGCCACCCAAGAAGGCCCAAACATGAGTGACATGAAAACAATGTTCGACGGCGACAACATTGGTGACTTGAACAAGCTTCCTTGCTTTGTATACGAAGAGCCAGAGAGAGGGTACAGCCTCGTCGATTGCGCCGTTTGTTTGGACAATTTCAAGGTCGGTGATGCGTGCAGGTTGTTACCCAATTGCGGCCACAGCTTTCACGTTCTCTGTATTGACTCCTGGATACTCCAGACGCCCGTTTGCCCCATTTGTAGAACATTTGTTCATTCTCGATTACTGCTTCCCTCCAAACAGAGGGAACAAACCGCTGTTTCTGATCCTTTACAAATTGTAACGGTCGATCTCTAA 555 0.4667 MCDDESNEAGANKFDQKQTIAKSEGKKLGIMEIVISLIILFGGIAVLVVIHVCVVGRAFRGDNNRGSDQATQEGPNMSDMKTMFDGDNIGDLNKLPCFVYEEPERGYSLVDCAVCLDNFKVGDACRLLPNCGHSFHVLCIDSWILQTPVCPICRTFVHSRLLLPSKQREQTAVSDPLQIVTVDL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr897g00001 184 Pfam Ring finger domain 111 154 IPR001841 -
Mupr897g00001 184 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 160 IPR013083 -
Mupr897g00001 184 ProSiteProfiles Zinc finger RING-type profile. 112 154 IPR001841 -
Mupr897g00001 184 SUPERFAMILY RING/U-box 95 160 - -
Mupr897g00001 184 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 30 159 - -
Mupr897g00001 184 SMART ring_2 112 153 IPR001841 -
Mupr897g00001 184 FunFam RING-H2 finger protein ATL2K 87 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr897g00001 Mupr-Chr897 2018 2637 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr897g00001 85 158 C3H Transcription Factor Family AT4G30370 45.946 2.13e-18 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr897g00001 - - gmx:102662620 200.675