Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8976g00001 ATGGGAAGGCAACCTTGTTGTGACAAAGTGGGGTTGAAGAAGGGGCCATGGACTGCAGAGGAGGATAAGAAACTCATCAACTTCATCCTCACTAATGGCCAATGTTGCTGGAGGGCTGTCCCTAAGCTAGCAGGGCTGTTAAGGTGTGGCAAGAGTTGTAGGCTCAGATGGACAAACTACCTAAGGCCAGACCTAAAGAGAGGTCTTCTATCAGAATATGAAGAGAAAATGGTCATTGATCTCCATGCTCAACTTGGCAATAGATGGTCTAAGATTGCTTCTCATCTTCCTGGAAGAACTGATAATGAGATAAAGAACCATTGGAACACCCACATAAAGAAAAAGCTCAAAAAAATGGGAATTGATCCTGTCACTCACAAGTCACTTTCCAATACAACTGAGCAAATTCAAGTACAACCGGATCAACCATTGCAAGAACAACATGAGCAACAATCTATCCAAGTTGAGCATGACCCCAAATTTGAACCTGAAAATGAGCAAAACAAGGAGCCAGAGACTTCAATTGAATCATCAAGCATCACTGAAGAAGCTAAGGAGGAAGACCAAATTATGACACCATTATTTGACTCAATGAATGAGTTCTGCACTGATGAAGTTCCCATAATAGAACCTAATGAGATTCTAGTCCCTTCTGCTCCTTCCACTTCACCAACCACTACTACATCATCATCCTCAACATCAACATCATCATCATCTTATTCAAATTCGTCCGACTTCCTTGAAGACCTGCTGCTCCCAGATTTTGACTGGTCTGATAATAACATTGACAATAACAACTGCAGTATGGCCTTGTGGGATGATGACTTCATTAGAAGTTGGAATTTGCTTATCAATGATGATCATGATGATGGTGACACAAAGCAAGTTTTTGATGCTCCCATCAATCAGTACCCAAGAGTGATCATGGATTCAGAATCTTGGGCTTATGGGTTGTTTTGA 960 0.4146 MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPVTHKSLSNTTEQIQVQPDQPLQEQHEQQSIQVEHDPKFEPENEQNKEPETSIESSSITEEAKEEDQIMTPLFDSMNEFCTDEVPIIEPNEILVPSAPSTSPTTTTSSSSTSTSSSSYSNSSDFLEDLLLPDFDWSDNNIDNNNCSMALWDDDFIRSWNLLINDDHDDGDTKQVFDAPINQYPRVIMDSESWAYGLF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8976g00001 319 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 239 - -
Mupr8976g00001 319 SMART sant 66 114 IPR001005 -
Mupr8976g00001 319 SMART sant 13 63 IPR001005 -
Mupr8976g00001 319 MobiDBLite consensus disorder prediction 215 242 - -
Mupr8976g00001 319 CDD SANT 16 61 IPR001005 -
Mupr8976g00001 319 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mupr8976g00001 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mupr8976g00001 319 MobiDBLite consensus disorder prediction 151 171 - -
Mupr8976g00001 319 MobiDBLite consensus disorder prediction 135 187 - -
Mupr8976g00001 319 MobiDBLite consensus disorder prediction 135 150 - -
Mupr8976g00001 319 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mupr8976g00001 319 MobiDBLite consensus disorder prediction 216 242 - -
Mupr8976g00001 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mupr8976g00001 319 FunFam MYB transcription factor 11 67 - -
Mupr8976g00001 319 CDD SANT 74 112 IPR001005 -
Mupr8976g00001 319 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mupr8976g00001 319 Gene3D - 11 67 - -
Mupr8976g00001 319 Gene3D - 70 154 - -
Mupr8976g00001 319 FunFam Myb transcription factor 71 133 - -
Mupr8976g00001 319 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Mupr8976g00001 319 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8976g00001 Mupr-Chr8976 11820 13743 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8976g00001 1 319 MYB Transcription Factor Family AT5G16600 49.143 1.42e-99 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr8976g00001 Myb_DNA-binding 9.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8976g00001 K09422 - gmx:100803624 509.22