Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8970g00001 ATGTTCCCTTTACAACGTGGCAACGAGCTGGTGATCCAGTTTTCTAATGGTTTCCACCCGCAACACAATATCTCCCAAGATCTCATTCTGGAACTGGATGATCACGATAATCTCGCTTGTTCCGATAAAAAATTGCTTACTATCGACCCAAACAAGCTATTTTCTGGAGCTCAGTCCAGTCACGCTAATTCTAACGAACATTCAAAAAAGATGGTTCACAAAGAGATTGAAAGGCAAAGGAGGCAAGAAATGGCTACCCTTCACGCCTCTCTTAGATCTCTTCTTCCTCTTCAATTCATCAAGGGAAAGCGTTCGATATCTGATCAAATGAACGAGGCAGTGAATTACATAAACCACCTGCAGAAGAATATTAAAGAAGTGAGTGACAAGAGGGATGAACTGAAGAAGAAAGTACTCTCCATAAATCACAGCCTCCAAAGTCATGAGACCAAGCATAAATCTAGCTGTTTCACTGTCCACCAGAATAGTGGAGGTGTGGGGATTGAAATGGAAGGGGTTCCACTTTCAAAGTTGCTTCAACTACTGTTGGAAGAGGGACTTGAAGTTGTTAGTTGTCTTTCAACTCAAGTCAATGGCAGATTACTCCACAGTGTGCAGTGTGAGGTCGACAATTCCGACAGTGTAGATCTATCTGAGCTGAGAAGGAAATTTTCCAAACGAAAAATAGATAATAGATGGTACGGGATTCAAGTCCCTTCAGGAGAAGAAATCAGGAGTGCAGAGTCGGAACTGACTCAATCCAGTAGAGTGTCAAGACCAACTCGGCACAGTTGGAGTTGGATTCGAAGTGTCAAGACCGACTCAGCACAGTTAGAGTCGTCACCGGCATTTTTAGGAAAAATGCTAAGAAACCTTGGGTTGAATAAGATAGATTTGAAATCAGAGTATGGGCTCAAGAGTCGGTTACATTGGAAAATATTTACAAAAGGTGAGCGTGGGATGCTTTTGAGGCATGGATGGTTAGTTGGTAGGAAGGGTCGAGACCGGCTTGGCACAGTTGGAGTGTCGAAACCAGCTCGGCGCAGATGGAGTGTCGAGACCGGCTCGACGCAGTTGGAGTGCTCAGACCGGCTTGGTGCAGTGGGTATGAAAGGGGCCGAGACCGAGTCAGCCAGCTGGTGTGGAAGGAGTCGAGATCGAGTCAGCTAG 1170 0.4538 MFPLQRGNELVIQFSNGFHPQHNISQDLILELDDHDNLACSDKKLLTIDPNKLFSGAQSSHANSNEHSKKMVHKEIERQRRQEMATLHASLRSLLPLQFIKGKRSISDQMNEAVNYINHLQKNIKEVSDKRDELKKKVLSINHSLQSHETKHKSSCFTVHQNSGGVGIEMEGVPLSKLLQLLLEEGLEVVSCLSTQVNGRLLHSVQCEVDNSDSVDLSELRRKFSKRKIDNRWYGIQVPSGEEIRSAESELTQSSRVSRPTRHSWSWIRSVKTDSAQLESSPAFLGKMLRNLGLNKIDLKSEYGLKSRLHWKIFTKGERGMLLRHGWLVGRKGRDRLGTVGVSKPARRRWSVETGSTQLECSDRLGAVGMKGAETESASWCGRSRDRVS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8970g00001 389 FunFam Transcription factor bHLH126 60 150 - -
Mupr8970g00001 389 Coils Coil 110 137 - -
Mupr8970g00001 389 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 65 144 IPR036638 GO:0046983
Mupr8970g00001 389 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 62 226 - -
Mupr8970g00001 389 CDD bHLH_AtORG2_like 69 136 - -
Mupr8970g00001 389 Pfam Helix-loop-helix DNA-binding domain 69 121 IPR011598 GO:0046983
Mupr8970g00001 389 Gene3D - 59 152 IPR036638 GO:0046983
Mupr8970g00001 389 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 68 120 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8970g00001 Mupr-Chr8970 1788 5286 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8970g00001 65 228 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 46.369 7.32e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr8970g00001 HLH 2.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8970g00001 - - gmx:100775836 308.916