Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr896g00002 ATGGACTTCGCCGAGAAGCTTGAATCGGAATCCGCGACCGTCCTCACGGATCAGCCTCGGAATGTTTCGGTCGTCAATGGTTACATTGTTTACACTCGAGCCAAGAGGTCTCTCGATTCCTGTAACGGTTTTCCTGAACCCGTGGAACTCAAGGCGAATGCGGAGCATGCAGTTAAAACGGAGAACGGAGAGTGTAAGGATCTGAAGAATGAGTCCTCAGAGGTGGCGCGCAAGCGGTATCGGCGATCGGAATCGAAAGCGAAGGTTGAGTGCTGTGATCAGACGGTGGCTAGTGAGTCGGAACAAGTTGCGAATGGTGGCAGTGGAATCAACGGTGCATTGGCAGTACCAAGGAGCAAGATGGAGTTGAAGATGTCGAAGAAGATTGTGGTCAACCGAAAGCCTATGACTGTCAAGGAGCTCTTTGATACAGGTTTTCTAGATGGGGTCCCGGTAGTTTACATGGGCGGTATTAAGAAGGTTCGTTTTCATGTGCTCTGCATGAATGAAGGAGCTTCGGGATTACGAGGTGAGATTAGAGATGGGGGAATATTGTGCTCGTGCTGTCTATGCAATGGTCGCAGGGTTATTCCACCTTCCCAATTCGAGATCCATGCTTGCAAACAGTATAGGAGAGCTGCGCAGTATATTTGTCTCGAAAATGGAAAGAGCCTCCTTGATCTGTTGAGAGCATGCAGGGGAGCTACCCTGCATACTTTGGAGGTGACAGTTCAAAATTTTGTTTGTTCTCCACCTGAAGAAAGATATTTTACTTGTAAAAAGTGCAAAGGTGAGCTTTGCTTCTGCTATTCAGAGTCATTGATTGTAATTTTATTTGCAAAAATTAAGGGGAAATGCAATAGAGTTTCTTTTTTTGTTTTCATTGAGTGCTTACTATTAGATGTTTCCCTTCGTCATTTGTGGAAAGAGTGGGGCCTATATGCCGTTCTTGTGTGGAATCAAGGAAGTCTGAAGAAAGTTCAAATAACGTTTCCTAGACCAGTGTTGCTCTCCAACCCATCCTGTACTTCTGAGCTGTCTGTCTCTTCACAAATTAAGAGACACTGGAAGAAAAGAACAAAGTCAAAAAGGATTAGCCGTTCAAGTTCTTCCAAGAATGCTTCTGCATCTGTACTACCCCGGAAGAAAAAGTTGTTGAAGAAGAGAAAGAAGTCACTGTCAGTAAAGTTGAAGTCCCCAGAAAAGACTTCAAATTCAAAGTGTTTATCTAATAAGAGTCAATGGAAGATAACTAAGAAGGATCAGCGGTTGCATAAGTTAGTTTTTGAGGAAAATGGATTGCCTGATGGAACTGAAGTAGCTTATTATGCACGTGGACAGGTTGTTTGTGTTCACATTTTGGTTGACAGAAATTGCTTGAAGGTTTCAAAATGGGCTCTGGAATTGTTTGTCGATGCTGCAACACTGAGATCAGCCCCTCACAGTTTGAGGTCCATGCAGGCTGGGCTTCTCGCAAGAAACCGTGAGTCTTTTCTTCCTTGGGAGTTGTTGGGAGGTTATGCATACATTTACACATCAAATGGGGTGTCTCTCCATGAGTTGGCAATATCTCTCTCAAAAGATCGAAAATACTCTGAGAAGGACAATGATGATCTATGCATTGTTTGTTGGGATGGTGGTAATCTGTTGCTTTGCGATGGATGCCCAAGAGCATTTCATAAAGAATGTGCGGCTCTTTCAAGTATTCCGCATGGTGACTGGTACTGTCAGTTTTGCCAAAACATGTTCCAGAGAGAAAAGTTTGTGGCACACAATGCCAATGCTGTGGCAGCTGGAAGGGTTGAAGGAGTTGATCCTATTGAACAGATTACAAATAGATGCATTCGCATAGTCAAAGACATTGAAGCAGAGCTTAGTGGGTGTGCTTTATGCAGGGGTGTTGATTTCAGCAGATCTGGCTTTGGTCCACGCACAATAATACTCTGCGACCAGTGTGAAAAGGAATATCATGTTGGCTGTTTGAGGGATCACAAGATGGCATTTTTAAAAGAATTGCCGGAAGGTAATTGGCTTTGTTGCAATGATTGCACAAGAATACATTCTACTTTGGAGAACCTTTTGGTTAGGGGGGCCGACAGACTCCCTGAATCTCTCTTGGGTGTTATAAAGAAGAAGCAAGAGGAAAAAGGATTAGAACTCATCAATGATATTGATGTAAGATGGAGGCTTCTTAATGGAAAAATTGCTTCTCCTGAAACTAGACCATTGCTTTTGGAGGCTGTTTCAATCTTTCATGAATGCTTTAATCCTATAGTTGATGCAGCTAGTGGACGTGACCTTATTCCAGCCATGGTTTATGGTTCATCCGTGGTATCTGCGGGCATGCTTCGAATTTTTGGCACAGATATTGCTGAACTCCCTTTAGTTGCAACGAGTAACGGGAACCATGGAAAGGGCTACTTCCAAACACTCTTCTCCTGCATCGAGAGGCTGCTGGCTTTCTTGAATGTGAAGAACCTTGTGCTGCCCGCTGCTGAAGAAGCAGAATCCATATGGACTGATAAATTTGGGTTTAGCAAGATGAAACCAGATCAGCTTACCAACTACAGAAAGAACTGCAATCAGATCGTAACGTTCAAAGGGACAAATATGCTGCATAAAATGGTACCGTCGTGTCGGTTTATGTTAAGAGTACACAAGATGGGATTCAAGAGAACCCTCATTTGGCTTTCTGGCTCTGTCATTTTTACCTTTTCTATCATAATTGTTCTTTATACCCCGCCACCTTCCCCCACTGCTAGTCTTCAAGATAGTTCCAGTTTCCAGCTTGGAATATTTAGTAAGATTATGAAGCTTGGTGGCGGTCAAGACTTAGTGTCTATGCTGACAAGTATAGCTAGAAGGAGACATCATCATCATCACCGGAGGAGACATAAGGAAAAATGTGACGGGGCCAAATGGGATTCGAGGCTTATTCAAGACTATAATGTGAATCTCGTATTCACGGTTGACTTAAAGGGCTGTGCTAATTTCAGTAGCGTGCAGAAAGCCATTGATGCTGTTCCTGAATCTAGCTCTGATACCACCCTTATCATAATCGATAGTGGTACATACAGGGAGAAGGTAGTGGTGCAGGCCAACAAAACAAACTTGATACTTGAAGGTCAAGGGTATCTAAATACAATCATAGAATGGAACGACACCGCGAATTCCACGGGCGGGACTTTCTATAGCTACTCGTTTGGCATCTTTGCTTCTAAGTTCAAGGCTTACAACATCAGCTTTAAGAACACGGCTCCTCCACCGTCACCAGGAGTGGTTGGGGCACAAGCAGTGGCATTGAGGGTTAGCGGTGATCAAGCTGCTTTCTATGGCTGTGGCTTTTATGGTGCGCAGGACACACTCAATGATGACAGTGGGAGACATTATTTTAAAGAATGTTTCATCCAAGGATCCATTGATTTCATATTTGGAAATGCTAGATCACTTTACGAGGATTGTACCATAAACTGTGTAGCAAAAGAAGAGAGTATAGAGATTAGCGGTTCAATCACCGCTCAAGGGAGGCAATCGATGAACGAGGAAAGTGGGTTTTCGTTTGTGAATTGTAGGATTGTTGGGAGTGGGAGAGTGTGGCTTGGAAGAGCTTGGGGACCCTTTGCCACTGTCGTCTTCTCAACAACATACATGTCTGATGTCGTTGCTCCTCAAGGCTGGGACGATTGGAGAGATCCCTCTAGAGACCAGAGCGTCTTCTTTGGGGAGTACCGTTGTCTTGGAGCTGGAGCAAATTATACATCCAGAGTCTCTTATGCGAAGCAACTTAGGGATTACGAAGCAAACTCCTACACGAGTATTTCGTACATTGATGGAAATGATTGGCTTCTTAATTATTTTCAAAACTATGCTAACCCTTCTTCATATATCTAA 3891 0.4369 MDFAEKLESESATVLTDQPRNVSVVNGYIVYTRAKRSLDSCNGFPEPVELKANAEHAVKTENGECKDLKNESSEVARKRYRRSESKAKVECCDQTVASESEQVANGGSGINGALAVPRSKMELKMSKKIVVNRKPMTVKELFDTGFLDGVPVVYMGGIKKVRFHVLCMNEGASGLRGEIRDGGILCSCCLCNGRRVIPPSQFEIHACKQYRRAAQYICLENGKSLLDLLRACRGATLHTLEVTVQNFVCSPPEERYFTCKKCKGELCFCYSESLIVILFAKIKGKCNRVSFFVFIECLLLDVSLRHLWKEWGLYAVLVWNQGSLKKVQITFPRPVLLSNPSCTSELSVSSQIKRHWKKRTKSKRISRSSSSKNASASVLPRKKKLLKKRKKSLSVKLKSPEKTSNSKCLSNKSQWKITKKDQRLHKLVFEENGLPDGTEVAYYARGQVVCVHILVDRNCLKVSKWALELFVDAATLRSAPHSLRSMQAGLLARNRESFLPWELLGGYAYIYTSNGVSLHELAISLSKDRKYSEKDNDDLCIVCWDGGNLLLCDGCPRAFHKECAALSSIPHGDWYCQFCQNMFQREKFVAHNANAVAAGRVEGVDPIEQITNRCIRIVKDIEAELSGCALCRGVDFSRSGFGPRTIILCDQCEKEYHVGCLRDHKMAFLKELPEGNWLCCNDCTRIHSTLENLLVRGADRLPESLLGVIKKKQEEKGLELINDIDVRWRLLNGKIASPETRPLLLEAVSIFHECFNPIVDAASGRDLIPAMVYGSSVVSAGMLRIFGTDIAELPLVATSNGNHGKGYFQTLFSCIERLLAFLNVKNLVLPAAEEAESIWTDKFGFSKMKPDQLTNYRKNCNQIVTFKGTNMLHKMVPSCRFMLRVHKMGFKRTLIWLSGSVIFTFSIIIVLYTPPPSPTASLQDSSSFQLGIFSKIMKLGGGQDLVSMLTSIARRRHHHHHRRRHKEKCDGAKWDSRLIQDYNVNLVFTVDLKGCANFSSVQKAIDAVPESSSDTTLIIIDSGTYREKVVVQANKTNLILEGQGYLNTIIEWNDTANSTGGTFYSYSFGIFASKFKAYNISFKNTAPPPSPGVVGAQAVALRVSGDQAAFYGCGFYGAQDTLNDDSGRHYFKECFIQGSIDFIFGNARSLYEDCTINCVAKEESIEISGSITAQGRQSMNEESGFSFVNCRIVGSGRVWLGRAWGPFATVVFSTTYMSDVVAPQGWDDWRDPSRDQSVFFGEYRCLGAGANYTSRVSYAKQLRDYEANSYTSISYIDGNDWLLNYFQNYANPSSYI 1296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr896g00002 1296 MobiDBLite consensus disorder prediction 353 410 - -
Mupr896g00002 1296 Pfam Tify domain binding domain 177 232 IPR032308 -
Mupr896g00002 1296 SUPERFAMILY Pectin lyase-like 985 1283 IPR011050 -
Mupr896g00002 1296 Pfam Pectinesterase 990 1279 IPR000070 GO:0030599|GO:0042545
Mupr896g00002 1296 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 525 614 IPR013083 -
Mupr896g00002 1296 CDD PHD1_AIRE 539 579 - -
Mupr896g00002 1296 PANTHER AUTOIMMUNE REGULATOR 65 875 - -
Mupr896g00002 1296 MobiDBLite consensus disorder prediction 381 395 - -
Mupr896g00002 1296 ProSitePatterns Pectinesterase signature 2. 1136 1145 IPR033131 -
Mupr896g00002 1296 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 624 686 IPR013083 -
Mupr896g00002 1296 SMART PHD_3 539 580 IPR001965 -
Mupr896g00002 1296 SMART PHD_3 627 684 IPR001965 -
Mupr896g00002 1296 SUPERFAMILY FYVE/PHD zinc finger 526 584 IPR011011 -
Mupr896g00002 1296 ProSitePatterns Zinc finger PHD-type signature. 540 579 IPR019786 -
Mupr896g00002 1296 Coils Coil 51 71 - -
Mupr896g00002 1296 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 526 603 - -
Mupr896g00002 1296 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 624 686 - -
Mupr896g00002 1296 FunFam Pectinesterase 982 1287 - -
Mupr896g00002 1296 ProSiteProfiles Zinc finger PHD-type profile. 537 582 IPR019787 -
Mupr896g00002 1296 SUPERFAMILY FYVE/PHD zinc finger 619 681 IPR011011 -
Mupr896g00002 1296 Gene3D - 982 1290 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr896g00002 Mupr-Chr896 11948 30456 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr896g00002 127 889 PHD Transcription Factor Family AT2G36720 45.386 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr896g00002 - - gmx:100802562 1251.88