LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr8963g00001	ATGAGAAGTCATTGGCTCTCTCCAACTGAGGCAGGCGGCCCTGCCAAACGCAGAACCTCCGGCAGGAATTGCCACCGCAAGCACGTCGAAGACGGTTATTCCGAAAGCAAACAAACAAACCCTAATTTCTATAGTATAGTGTTATTAATAATTAAGGATATGAGTGAGAAAGGTGGCATGAGCGAGGGGCAGTCGATGGTGCTGCACGGGAAGTACGAGCTGGGGCGCGTGCTGGGACACGGGACGTTCGCGAAGGTGTACCACGCGCGGCACCTGAAGACGGGGCAGCACGTGGCGATGAAGGTGGTGGGGAAAGAGAAGGTGATAAAGGTAGGGATGACGGAGCAGTTAAAGAGGGAGATCTCGGTGATGAAAATGGTGAAGCACCCAAACATAGTGGAACTCCACGAAGTGATGGCCAGCAAGTCCAAGATCTACATCGCCATGGAGCTCGTTCGAGGTGGGGAGCTCTTCAACAAGGTCTCCAAGGGTCGACTGAAGGAGGACGTGGCCAGACTCTACTTTCAGCAGCTAATCTCCGCCGTGGACTTCTGCCACAGCCGCGGCGTCTACCACCGCGACCTCAAGCCGGAGAATCTCCTCCTGGACGAGCACGGCAACCTCAAGGTGTCCGACTTCGGACTTACCGCCTTCTCGGACCACTGCAGGAAGGATGGCCTGCTGCACACCACGTGCGGCACGCCCGCGTACGTGTCGCCGGAAGTGATTGCGAAAAAAGGCTATGACGGTGCCAAGGCTGATATATGGTCGTGCGGAGTAATCCTCTATGTCCTCCTGGCGGGGTTCTTACCCTTTCAGGATGACAATTTGGTGGCCATGTATAAGAAAATATACAGAGGGGACTTCAAGTGTCCACCGTGGTTCTCCGTGGAGGCGCGAAGGCTGGTTACGAGGCTCCTGGACCCGAACCCGGACACCCGGATTAGTATATCTCAGGTGATGGAGTGTTCCTGGTTTAAGAAAGCGGTGCCGAGGAAGGTGAAGGAGGTGGAGGACGACTTTGGCTTGGAGGAGAAGCGCGAGGGGCCGGCGGCGACCATGAACGCCTTTCACATAATCTCCTTGTCGGAGGGGTTCGATTTGTCGCCCTTGTTTCAAGAGAAGAAGATGGAGGAGATGCGGTTCGCCACCGCGGGGACGGCGAGCACGGTGATCTCCCGGCTGGAGGAGGTGGCCAAGGCAGGGAAGTTTGACGTGAAGAGTAGCGAGACGAAGGTGAGGCTTCAGGGGCAGGAGCGTGGGAGAAAGGGGAAGCTGGCCATTGCGGCGGATATCTACGCCGTGACGCCGTCGTTTCTGGTGGTGGAGGTCAAGAAGGACAACGGTGATACCTTGGAGTATAATCAATTCTGCAGCAAACAGCTTCGTCCCGCGCTTAAGGATATCTTCTGGAATTCCGCACCTGCTAGTGCTTGA	1437	0.5602	MRSHWLSPTEAGGPAKRRTSGRNCHRKHVEDGYSESKQTNPNFYSIVLLIIKDMSEKGGMSEGQSMVLHGKYELGRVLGHGTFAKVYHARHLKTGQHVAMKVVGKEKVIKVGMTEQLKREISVMKMVKHPNIVELHEVMASKSKIYIAMELVRGGELFNKVSKGRLKEDVARLYFQQLISAVDFCHSRGVYHRDLKPENLLLDEHGNLKVSDFGLTAFSDHCRKDGLLHTTCGTPAYVSPEVIAKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVAMYKKIYRGDFKCPPWFSVEARRLVTRLLDPNPDTRISISQVMECSWFKKAVPRKVKEVEDDFGLEEKREGPAATMNAFHIISLSEGFDLSPLFQEKKMEEMRFATAGTASTVISRLEEVAKAGKFDVKSSETKVRLQGQERGRKGKLAIAADIYAVTPSFLVVEVKKDNGDTLEYNQFCSKQLRPALKDIFWNSAPASA	478

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr8963g00001	478	ProSiteProfiles	Protein kinase domain profile.	72	326	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr8963g00001	478	FunFam	Non-specific serine/threonine protein kinase	62	350	-	-
	Mupr8963g00001	478	CDD	CIPK_C	355	467	-	-
	Mupr8963g00001	478	Pfam	NAF domain	352	407	IPR004041	GO:0007165
	Mupr8963g00001	478	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	190	202	IPR008271	GO:0004672\|GO:0006468
	Mupr8963g00001	478	ProSitePatterns	Protein kinases ATP-binding region signature.	78	105	IPR017441	GO:0005524
	Mupr8963g00001	478	Gene3D	Phosphorylase Kinase; domain 1	69	153	-	-
	Mupr8963g00001	478	MobiDBLite	consensus disorder prediction	1	36	-	-
	Mupr8963g00001	478	ProSiteProfiles	NAF domain profile.	349	373	IPR018451	GO:0007165
	Mupr8963g00001	478	CDD	STKc_SnRK3	71	325	-	-
	Mupr8963g00001	478	SUPERFAMILY	Protein kinase-like (PK-like)	68	334	IPR011009	-
	Mupr8963g00001	478	FunFam	Non-specific serine/threonine protein kinase	350	471	-	-
	Mupr8963g00001	478	SMART	serkin_6	72	326	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr8963g00001	478	Gene3D	Kinase associated domain 1, KA1	349	472	-	-
	Mupr8963g00001	478	FunFam	Non-specific serine/threonine protein kinase	63	151	-	-
	Mupr8963g00001	478	Pfam	Protein kinase domain	72	326	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr8963g00001	478	Gene3D	Transferase(Phosphotransferase) domain 1	154	332	-	-
	Mupr8963g00001	478	PANTHER	CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED	64	467	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr8963g00001	Mupr-Chr8963	1351	2827	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr8963g00001	58	476	CBL-interacting serine-threonine protein kinases	AT4G30960	72.685	0.0	624

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CAMKL-CHK1	Mupr8963g00001		Pkinase	1.6e-72	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr8963g00001	-		K07198	var:108321114	755.362