Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8960g00003 ATGCACGGGAAAAAGGAGCATGAAGAGGAGTATATAAGGAAAGGGCCATGGAAAGCAGAAGAAGATGAGGTGCTACTTAACCACGTTAAGAAGTATGGTCCTAGAGATTGGAGCTCCATTCGATCCAAGGGCCTTCTTCAAAGGACTGGCAAGTCCTGTCGTCTTCGTTGGGTCAATAAGCTTCGACCAAACCTCAAGAATGGTTGCAAATTTTCCCTAGAGGAAGAGAGGACTGTCATAGAGTTGCAGGCACAATTTGGGAACAGGTGGGCTAGGATTGCATCCTATTTGCCAGGGAGAACAGACAATGATGTTAAAAATTTCTGGAGCAGTAGGCAGAAGAGATTGGCTAGGATTCTGCAGACATCAGCAACAACTCCCAAATCACAGAAAAATAAAACTATAGTTCCTTCCTTTCTTGATGTTCCAACTTTGGAGGCTCCTAAGTTCAGTTCATCATCAGAGGGAGATCCACCATCAAAGCCTCAGTTATGCTCACTACCCTTCATTGAGAATTCTGTGATCAAAATGGCGTCTTTGCCAGATCTCATAAAGTCTGAGTTGCCTAGTTGTTCTGACACAAGCCAGGTTGAGCAAGAGTTTACCCTTTTTGAGAGCTATAAAAGCATTGAACAGAATCAACAGATTGCCTTCCCTCAGATTCCAGAACTCCACAATGATCTCACATTCTCAATGGGAAGCCAAGATCTCTTGGCCAGAATTGATGAGCCTTGTTTCATTGAAGACCTAATTGGTCCTCTTGATGCATCTGAGTTTGGAACTTTCTTTGAGCCACCAGGAAGTTGCAGAATTGTGACATGGGATGCTATTGATAATTCCAAAGACTGTGACAGCTTCTTTGATGATTTCCCTGTGGACATGTTTGATCACATGGAGCCACCTCCAAGCCCTTCAAACCTCTGA 924 0.4383 MHGKKEHEEEYIRKGPWKAEEDEVLLNHVKKYGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLKNGCKFSLEEERTVIELQAQFGNRWARIASYLPGRTDNDVKNFWSSRQKRLARILQTSATTPKSQKNKTIVPSFLDVPTLEAPKFSSSSEGDPPSKPQLCSLPFIENSVIKMASLPDLIKSELPSCSDTSQVEQEFTLFESYKSIEQNQQIAFPQIPELHNDLTFSMGSQDLLARIDEPCFIEDLIGPLDASEFGTFFEPPGSCRIVTWDAIDNSKDCDSFFDDFPVDMFDHMEPPPSPSNL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8960g00003 307 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mupr8960g00003 307 Pfam Myb-like DNA-binding domain 17 77 - -
Mupr8960g00003 307 Gene3D - 14 66 - -
Mupr8960g00003 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 117 IPR017930 -
Mupr8960g00003 307 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Mupr8960g00003 307 CDD SANT 70 109 IPR001005 -
Mupr8960g00003 307 CDD SANT 16 61 IPR001005 -
Mupr8960g00003 307 SMART sant 67 115 IPR001005 -
Mupr8960g00003 307 SMART sant 13 63 IPR001005 -
Mupr8960g00003 307 FunFam MYB transcription factor 14 66 - -
Mupr8960g00003 307 Gene3D - 69 136 - -
Mupr8960g00003 307 ProSiteProfiles Myb-like domain profile. 70 113 IPR001005 -
Mupr8960g00003 307 PANTHER TRANSCRIPTION FACTOR DUO1 1 306 - -
Mupr8960g00003 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 65 IPR017930 -
Mupr8960g00003 307 FunFam Transcription factor GAMYB 69 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8960g00003 Mupr-Chr8960 11221 13497 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8960g00003 4 304 MYB Transcription Factor Family AT3G60460 51.829 6.83e-89 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr8960g00003 Myb_DNA-bind_6 3.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8960g00003 K09422 - gmx:100805384 501.13