Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr895g00001 ATGGGAAGAGCACCTTGCTGCGATAAGAATGGCCTCAAAAAAGGTCCATGGACGCCCGAGGAGGATCTCATGCTCACCAACTACATTCAGACTCATGGACCAGGAAATTGGCGAACCCTCCCCAAGAATGCAGGTCTACAAAGATGTGGCAAGAGTTGCCGCCTTCGATGGACTAATTATCTTAGACCCGATATCAAGAGAGGAAGGTTCTCCTTTGAAGAAGAAGAGACCATCATTCAGCTCCACAGTATCTTGGGAAACAAGTGGTCAGCTATAGCAGCTAGGTTGCCGGGAAGAACCGACAATGAAATAAAGAACTATTGGAACACCCACATTAGGAAGAGGTTGCTTCGAATGGGAATTGACCCTGTTACACACGCTCCACGCCTTGATCTTCTTGACATGTCCTCAATGCTCAGGTCAGTGATAGGGAACCCATCGTTTCTGAATCTGCAAGGCTTATTGGGTGCCCAAGCGTTGATGAACCCAGAGTTTTTGAAGCTTGCTGCCACTGCCACTTTGTTATCTTTGAAGAACGAGACCCCATCAAACTTGGTTTCACAACAAATTATCAATGCTGGGAATATTCAAGTACAAAGCCAAGTTGCCCCAAATCAGTTTCAGACGCCAACTCAAAGCAATAATGTGAATGCCTTATCAAGTTCCCCAGAGAGTTCAATTCCTTCCTATCTTGGGGAGAATTACCTGAACAATGCTCAACAAAATTACCAAGGTGATTTGCTACAGGACCCTGAATTGGTGCATTACTTAAACAATGCAAACCAAAACATAGGCTATGAATCAGTTCTATCTACGCCTTTGTCCACCCCAACCCCATTGAATTCATCATCCACGTATGTGAATAGCATCACGGAGGAAGAGAGGGACACCTATTGCAGCGATGTATTCAAGTTAGAAATTCCAGAGAGTCTGGACATTAGTGATTTC 948 0.4483 MGRAPCCDKNGLKKGPWTPEEDLMLTNYIQTHGPGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPRLDLLDMSSMLRSVIGNPSFLNLQGLLGAQALMNPEFLKLAATATLLSLKNETPSNLVSQQIINAGNIQVQSQVAPNQFQTPTQSNNVNALSSSPESSIPSYLGENYLNNAQQNYQGDLLQDPELVHYLNNANQNIGYESVLSTPLSTPTPLNSSSTYVNSITEEERDTYCSDVFKLEIPESLDISDF 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr895g00001 316 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mupr895g00001 316 CDD SANT 69 112 IPR001005 -
Mupr895g00001 316 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 255 - -
Mupr895g00001 316 FunFam Transcription factor MYB39 69 130 - -
Mupr895g00001 316 CDD SANT 16 61 IPR001005 -
Mupr895g00001 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mupr895g00001 316 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mupr895g00001 316 FunFam MYB-related transcription factor 13 66 - -
Mupr895g00001 316 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mupr895g00001 316 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mupr895g00001 316 SMART sant 13 63 IPR001005 -
Mupr895g00001 316 SMART sant 66 114 IPR001005 -
Mupr895g00001 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mupr895g00001 316 Gene3D - 13 66 - -
Mupr895g00001 316 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mupr895g00001 316 Gene3D - 69 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr895g00001 Mupr-Chr895 4725 5918 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr895g00001 1 316 MYB Transcription Factor Family AT4G21440 49.580 2.60e-105 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr895g00001 Myb_DNA-binding 5.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr895g00001 K09422 - gmx:100812189 484.952