Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8929g00002 ATGGTGATGAAGGTTTTGAAAGGCAAGCAAGTCCAACACATTAGAGAAAGGAGTGATAGTGATTGTGAGAAGATGAAGACGTGTAATGTTGCACAACATAGAAGTTTTGATGGGTCGAGGTTCAATTATGATTCTGATGAGATCATTGAGAGTGGTAGGAACAGTGAAAACAACTCAGACGCCAATAGCACCAACAAGAAGGGAATTCCTGCTAAGAATTTGATAGTTGAACGTCGCCGAAGGAAGAAGCTCAATGATAGACTCTATATGCTCAGATCCATTGTTCCCAATATAAGTGAAATGGATAAGGCTTCAATCCTTGGGGATGCAATCGAGTATTTGAAGGAACTTGTGCAAAAGATCAGTGACCTTCACAATGAATTGGAGTCGTCAACACCAACTGACACTTCATTATTGACACTTGAATCAAGCTTTCTTCATCCTCTAACACCCACTCTATCGACACTACCAGCCCTTACACAAGAACTTTGCCTCAACTCGCTGCCAAGCCCTAATGATCAACCTGCAAGGGTTGAGGTTGGGTTTCGCGAAGGAAGAGGTGTAAAGATCCATATGTTTTGCGACCGCAAACCCGGTCTCTTGCTCTCTACCATGAGGGCTCTCGACAACCTTGGGTTAGACATCCACCAGCAATTTCAATGGATTTGCTATGGATATTTTCCGAGCTCAGGTCAGGATGTCCATCCGGGGCATATTGAAGCAGTTCTGTTGGATTCAGCTGGCTTCCATAGCATGACCTAA 762 0.4383 MVMKVLKGKQVQHIRERSDSDCEKMKTCNVAQHRSFDGSRFNYDSDEIIESGRNSENNSDANSTNKKGIPAKNLIVERRRRKKLNDRLYMLRSIVPNISEMDKASILGDAIEYLKELVQKISDLHNELESSTPTDTSLLTLESSFLHPLTPTLSTLPALTQELCLNSLPSPNDQPARVEVGFREGRGVKIHMFCDRKPGLLLSTMRALDNLGLDIHQQFQWICYGYFPSSGQDVHPGHIEAVLLDSAGFHSMT 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8929g00002 253 CDD bHLH_AtAMS_like 71 135 - -
Mupr8929g00002 253 SMART finulus 74 123 IPR011598 GO:0046983
Mupr8929g00002 253 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 68 117 IPR011598 GO:0046983
Mupr8929g00002 253 Gene3D - 58 132 IPR036638 GO:0046983
Mupr8929g00002 253 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 132 IPR036638 GO:0046983
Mupr8929g00002 253 Pfam Helix-loop-helix DNA-binding domain 75 117 IPR011598 GO:0046983
Mupr8929g00002 253 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 30 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8929g00002 Mupr-Chr8929 18671 21553 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8929g00002 39 227 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 64.062 2.11e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr8929g00002 HLH 2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8929g00002 - - gmx:100217334 260.766